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SCNpilot_cont_1000_bf_scaffold_572

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_572_1
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

107..544
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00036A9EFF
Putative ABC transporter {ECO:0000313|EMBL:CCG01015.1}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
putative ABC transporter; K06147 ATP-binding cassette, subfamily B, bacterial
SCNpilot_cont_1000_bf_scaffold_572_2
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(441..1667)
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Amycolatopsis azurea DSM 43854 RepID=M2QNN3_9PSEU rbh
Uncharacterized protein {ECO:0000313|EMBL:CEL14372.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein rbh
SCNpilot_cont_1000_bf_scaffold_572_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1743..3284)
DNA (1542bp) protein (514aa)
mannosyltransferase; K14339 alpha-1,6-mannosyltransferase [EC:2.4.1.-]
Mannosyltransferase MptB n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYE9_PSEUX
Mannosyltransferase MptB {ECO:0000313|EMBL:AEA25589.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_bf_scaffold_572_4
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3433..3636
DNA (204bp) protein (68aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B3DC69
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ44929.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
SCNpilot_cont_1000_bf_scaffold_572_5
Amycolatopsis japonica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3796..4521
DNA (726bp) protein (242aa)
Uncharacterized protein n=3 Tax=Amycolatopsis mediterranei RepID=G0G212_AMYMS
Uncharacterized protein {ECO:0000313|EMBL:AIG79161.1}; TaxID=208439 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis japonica.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_572_6
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4556..5308
DNA (753bp) protein (251aa)
ANTAR domain protein n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3IVL3_FRASU
ANTAR domain-containing protein
ANTAR domain protein {ECO:0000313|EMBL:ADP82519.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
SCNpilot_cont_1000_bf_scaffold_572_7
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5377..6720
DNA (1344bp) protein (448aa)
Protein serine/threonine phosphatase with GAF(S) sensor(S) n=1 Tax=Frankia sp. CN3 RepID=G6HDL0_9ACTO
SpoIIE-like protein with GAF domain {ECO:0000313|EMBL:EXG79221.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
protein serine phosphatase with GAF(s) sensor(s)
SCNpilot_cont_1000_bf_scaffold_572_8
Streptomyces griseoaurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6888..7262)
DNA (375bp) protein (125aa)
anti-sigma factor antagonist n=1 Tax=Mycobacterium hassiacum RepID=UPI000372F9CD
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=996637 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseoaurantiacus M045.;"
anti-sigma-factor antagonist
SCNpilot_cont_1000_bf_scaffold_572_9
Arthrobacter sp. SPG23, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7592..7987
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI000373E2FE
SPG23_c1, whole genome shotgun sequence {ECO:0000313|EMBL:KIS29238.1}; TaxID=1610703 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. SPG23.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_572_10
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7968..9524
DNA (1557bp) protein (519aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00036F5D48 rbh
Diguanylate phosphodiesterase {ECO:0000313|EMBL:KIC68955.1}; TaxID=361575 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthrenivorans.;"
diguanylate cyclase/phosphodiesterase rbh
SCNpilot_cont_1000_bf_scaffold_572_11
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9502..10989)
DNA (1488bp) protein (496aa)
Uncharacterized protein n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G0M4_9DELT rbh
Uncharacterized protein {ECO:0000313|EMBL:EDM80670.1}; TaxID=391625 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_572_12
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10991..12247)
DNA (1257bp) protein (419aa)
Cytochrome P450 family protein n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JUX9_SACES
Cytochrome P450 family protein
Cytochrome P450 family protein {ECO:0000313|EMBL:CCH31645.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
SCNpilot_cont_1000_bf_scaffold_572_13
Arthrobacter chlorophenolicus, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12452..13255
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI000370CAC1
type 12 methyltransferase
Methyltransferase type 12 {ECO:0000313|EMBL:ACL38237.1}; TaxID=452863 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter chlorophenolicus (strain ATCC 700700 / DSM 12829 / JCM; 12360 / NCIMB 13794 / A6).;"
SCNpilot_cont_1000_bf_scaffold_572_14
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13396..13992)
DNA (597bp) protein (199aa)
TetR family transcriptional regulator n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEE3A
Transcriptional regulator {ECO:0000313|EMBL:EXG79215.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
TetR family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_572_15
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14011..15609
DNA (1599bp) protein (533aa)
CoA ligase (EC:6.2.1.-); K02182 crotonobetaine/carnitine-CoA ligase [EC:6.2.1.-]
CoA ligase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEE3B rbh
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II {ECO:0000313|EMBL:EXG79216.1}; Flags: Precursor;; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
SCNpilot_cont_1000_bf_scaffold_572_16
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15606..18854
DNA (3249bp) protein (1083aa)
carbamoyl-phosphate-synthetase n=1 Tax=Amycolatopsis methanolica RepID=UPI0003829F3C rbh
Biotin carboxylase {ECO:0000313|EMBL:AIJ24109.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
carbamoyl-phosphate synthase L chain ATP-binding protein
SCNpilot_cont_1000_bf_scaffold_572_17
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19026..22199
DNA (3174bp) protein (1058aa)
Transcriptional regulator, putative ATPase, winged helix family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXX9_PSEUX rbh
Transcriptional regulator, putative ATPase, winged helix family {ECO:0000313|EMBL:AEA23864.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
winged helix family transcriptional regulator rbh
SCNpilot_cont_1000_bf_scaffold_572_18
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22239..22850)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXX7_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23862.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_bf_scaffold_572_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22920..23507
DNA (588bp) protein (196aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXY7_PSEUX
cupin
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:AEA23872.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_bf_scaffold_572_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23533..25056)
DNA (1524bp) protein (508aa)
argininosuccinate lyase; K01755 argininosuccinate lyase [EC:4.3.2.1] rbh
Argininosuccinate lyase {ECO:0000313|EMBL:AEA23859.1}; EC=4.3.2.1 {ECO:0000313|EMBL:AEA23859.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Argininosuccinate lyase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWV7_PSEUX rbh
SCNpilot_cont_1000_bf_scaffold_572_21
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25053..26063)
DNA (1011bp) protein (337aa)
1-aminocyclopropane-1-carboxylate deaminase; K05396 D-cysteine desulfhydrase [EC:4.4.1.15] rbh
1-aminocyclopropane-1-carboxylate deaminase {ECO:0000313|EMBL:AEA23858.1}; EC=3.5.99.7 {ECO:0000313|EMBL:AEA23858.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
1-aminocyclopropane-1-carboxylate deaminase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWV6_PSEUX rbh
SCNpilot_cont_1000_bf_scaffold_572_22
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26060..27400)
DNA (1341bp) protein (447aa)
Fumarate lyase; K01756 adenylosuccinate lyase [EC:4.3.2.2] rbh
Fumarate lyase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWV5_PSEUX rbh
Fumarate lyase {ECO:0000313|EMBL:AEA23857.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_bf_scaffold_572_23
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27385..28308)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWV4_PSEUX rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA23856.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_bf_scaffold_572_24
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28305..29081)
DNA (777bp) protein (259aa)
phosphosulfolactate synthase; K08097 phosphosulfolactate synthase [EC:4.4.1.19] rbh
Phosphosulfolactate synthase {ECO:0000313|EMBL:AEA23855.1}; EC=4.4.1.19 {ECO:0000313|EMBL:AEA23855.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Phosphosulfolactate synthase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWV3_PSEUX rbh
SCNpilot_cont_1000_bf_scaffold_572_25
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29143..29484)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWV2_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23854.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_bf_scaffold_572_26
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29643..30041
DNA (399bp) protein (133aa)
OsmC family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWV1_PSEUX
OsmC family protein
OsmC family protein {ECO:0000313|EMBL:AEA23853.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_bf_scaffold_572_27
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30003..31211)
DNA (1209bp) protein (403aa)
hypothetical protein n=1 Tax=Streptomyces sp. 351MFTsu5.1 RepID=UPI0003666090 rbh
UPF0272 protein Pd630_LPD01929 {ECO:0000256|HAMAP-Rule:MF_01074}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;"
hypothetical protein; K09121 hypothetical protein rbh
SCNpilot_cont_1000_bf_scaffold_572_28
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31208..31894)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWV0_PSEUX rbh
hypothetical protein; K06898 rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA23852.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_bf_scaffold_572_29
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31891..32751)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CWU9_PSEUX rbh
hypothetical protein; K06864 uncharacterized protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEA23851.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_bf_scaffold_572_30
unknown

Not on your lists

32854..32931
DNA (78bp) protein (26aa)

This feature has no annotations

Displaying 30 items

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