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SCNpilot_cont_1000_bf_scaffold_715

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_715_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(277..2562)
DNA (2286bp) protein (762aa)
Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJT0_PSEUX rbh
cytochrome c oxidase caa3-type, assembly factor CtaG-like protein; K02351 putative membrane protein; K07245 putative copper resistance protein D rbh
Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein {ECO:0000313|EMBL:AEA26955.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_bf_scaffold_715_2
Streptomyces sp. CNQ-509, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2723..3289
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Streptomycetaceae bacterium MP113-05 RepID=V6L1H2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:AKH83704.1}; TaxID=444103 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. CNQ-509.;"
SCE46.16c; hypothetical protein
SCNpilot_cont_1000_bf_scaffold_715_3
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3296..5272)
DNA (1977bp) protein (659aa)
Diguanylate cyclase/phosphodiesterase (Fragment) n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RF00_9ACTO rbh
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:EEP70179.1}; Flags: Fragment;; TaxID=219305 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
PAS/PAC sensor(s)-containing diguanylate cyclase/phosphodiesterase rbh
SCNpilot_cont_1000_bf_scaffold_715_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5310..6098)
DNA (789bp) protein (263aa)
Ser/Thr phosphatase; K01090 protein phosphatase [EC:3.1.3.16]
hypothetical protein n=1 Tax=Actinoalloteichus spitiensis RepID=UPI0003639FDA
Protein serine/threonine phosphatase {ECO:0000313|EMBL:AEA26956.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_bf_scaffold_715_5
unknown

Not on your lists

comp(6156..6326)
DNA (171bp) protein (57aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_715_trna_1
unknown

Not on your lists

6389..6462
DNA (74bp)
transferRNA
SCNpilot_cont_1000_bf_scaffold_715_6
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6607..7473
DNA (867bp) protein (289aa)
Integrase family protein n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J6D8_FRASU rbh
integrase family protein rbh
Integrase family protein {ECO:0000313|EMBL:ADP79565.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
SCNpilot_cont_1000_bf_scaffold_715_7
unknown

Not on your lists

7470..8108
DNA (639bp) protein (213aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_715_8
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8240..8515
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SBN1_GEOOG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB76138.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
SCNpilot_cont_1000_bf_scaffold_715_9
unknown

Not on your lists

8515..8835
DNA (321bp) protein (107aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_715_10
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8832..10184
DNA (1353bp) protein (451aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEC41
Uncharacterized protein {ECO:0000313|EMBL:ETJ03701.1}; TaxID=1403939 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DORA_12.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_715_11
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10256..10963)
DNA (708bp) protein (236aa)
Resolvase domain protein n=1 Tax=Mycobacterium rhodesiae JS60 RepID=G4HZH4_MYCRH
Resolvase domain protein {ECO:0000313|EMBL:EHB55710.1}; TaxID=931627 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae JS60.;"
resolvase
SCNpilot_cont_1000_bf_scaffold_715_12
unknown

Not on your lists

11034..11666
DNA (633bp) protein (211aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_715_13
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

11656..13152
DNA (1497bp) protein (499aa)
Phage terminase-like protein protein large subunit-like protein n=1 Tax=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) RepID=D5SVR4_PLAL2
phage terminase large subunit-like protein
Phage terminase-like protein protein large subunit-like protein {ECO:0000313|EMBL:ADG69424.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
SCNpilot_cont_1000_bf_scaffold_715_14
unknown

Not on your lists

13149..13553
DNA (405bp) protein (135aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_715_15
unknown

Not on your lists

13557..14150
DNA (594bp) protein (198aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_715_16
unknown

Not on your lists

14153..14341
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_715_17
unknown

Not on your lists

14568..15221
DNA (654bp) protein (218aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_715_18
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15325..16344
DNA (1020bp) protein (340aa)
ATPase n=1 Tax=Salinispora pacifica RepID=UPI0003729292 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHK29117.1}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;"
ATPase rbh
SCNpilot_cont_1000_bf_scaffold_715_19
Trueperella pyogenes, Trueperella, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16467..17759)
DNA (1293bp) protein (431aa)
Rep n=1 Tax=Trueperella pyogenes RepID=P94171_9ACTO
Rep {ECO:0000313|EMBL:AAC46399.1}; TaxID=1661 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Trueperella.;" source="Trueperella pyogenes.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_715_20
Pseudonocardia autotrophica, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18022..19155)
DNA (1134bp) protein (378aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDB93 rbh
Uncharacterized protein {ECO:0000313|EMBL:BAJ53860.1}; TaxID=2074 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia autotrophica (Amycolata autotrophica) (Nocardia; autotrophica).;"
SCNpilot_cont_1000_bf_scaffold_715_21
unknown

Not on your lists

comp(19309..19683)
DNA (375bp) protein (125aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_715_22
unknown

Not on your lists

comp(19757..20068)
DNA (312bp) protein (104aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_715_23
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20325..21230)
DNA (906bp) protein (302aa)
Integrase family protein n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WQ17_ACTMD rbh
integrase family protein rbh
Integrase family protein {ECO:0000313|EMBL:ACU35073.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
SCNpilot_cont_1000_bf_scaffold_715_24
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21477..22097)
DNA (621bp) protein (207aa)
Putative transposase y4qE n=1 Tax=Rhodococcus wratislaviensis IFP 2016 RepID=L2TGP8_9NOCA
Putative transposase y4qE {ECO:0000313|EMBL:ELB89184.1}; TaxID=1195242 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis IFP 2016.;"
transposase y4qE
SCNpilot_cont_1000_bf_scaffold_715_25
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

22634..22876
DNA (243bp) protein (81aa)
transposase n=1 Tax=Brevibacterium linens RepID=UPI0001BC2C5C
transposase
Tax=RBG_16_RIF_CHLX_72_14_curated
Displaying 26 items

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