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SCNpilot_cont_1000_bf_scaffold_731

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_731_1
unknown

Not on your lists

comp(739..1137)
DNA (399bp) protein (133aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_731_2
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1210..1656)
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002626E63
Heat shock protein {ECO:0000313|EMBL:AIJ25606.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
hsp18; 18 kDa heat shock protein
SCNpilot_cont_1000_bf_scaffold_731_3
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1824..2246
DNA (423bp) protein (141aa)
Putative uncharacterized protein n=1 Tax=Amycolatopsis mediterranei (strain S699) RepID=G0FMF2_AMYMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK42692.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
SCNpilot_cont_1000_bf_scaffold_731_4
unknown

Not on your lists

comp(2657..3031)
DNA (375bp) protein (125aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_731_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3493..4464)
DNA (972bp) protein (324aa)
DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1]
DNA ligase D n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNA3_PSEUX
DNA ligase D {ECO:0000313|EMBL:AEA27127.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_bf_scaffold_731_6
unknown

Not on your lists

4629..4907
DNA (279bp) protein (93aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_731_7
unknown

Not on your lists

comp(4895..5128)
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_731_8
unknown

Not on your lists

comp(5083..5844)
DNA (762bp) protein (254aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_731_9
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6282..6929)
DNA (648bp) protein (216aa)
LuxR family transcriptional regulator n=1 Tax=Glaciibacter superstes RepID=UPI0003B7A26D
two component LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ADB75205.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
SCNpilot_cont_1000_bf_scaffold_731_10
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6917..8713)
DNA (1797bp) protein (599aa)
histidine kinase n=1 Tax=Glaciibacter superstes RepID=UPI0003B63DFA rbh
putative signal transduction histidine kinase
Putative signal transduction histidine kinase {ECO:0000313|EMBL:ADB75204.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
SCNpilot_cont_1000_bf_scaffold_731_11
Rhodococcus jostii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8960..10471
DNA (1512bp) protein (504aa)
Possible glycine rich protein n=1 Tax=Rhodococcus sp. (strain RHA1) RepID=Q0SG23_RHOSR
glycine rich protein
Possible glycine rich protein {ECO:0000313|EMBL:ABG93513.1}; TaxID=101510 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus jostii (strain RHA1).;"
SCNpilot_cont_1000_bf_scaffold_731_12
Mycobacterium vanbaalenii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10861..11301)
DNA (441bp) protein (147aa)
Transposase, mutator type n=1 Tax=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) RepID=A1T2J4_MYCVP
transposase, mutator type; K07493 putative transposase
Transposase, mutator type {ECO:0000313|EMBL:ABM11394.1}; TaxID=350058 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1).;"
SCNpilot_cont_1000_bf_scaffold_731_13
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

12580..13578
DNA (999bp) protein (333aa)
glucokinase; K00845 glucokinase [EC:2.7.1.2]
Glucokinase id=4125328 bin=GWC2_Nitrospirae_57_13 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
Tax=GWC2_Nitrospirae_57_13_curated
SCNpilot_cont_1000_bf_scaffold_731_14
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

13601..14548
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Streptomyces sp. 303MFCol5.2 RepID=UPI00037E7614
Uncharacterized protein {ECO:0000313|EMBL:KKR17357.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
SCNpilot_cont_1000_bf_scaffold_731_15
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14664..15647)
DNA (984bp) protein (328aa)
feruloyl esterase (EC:3.1.1.73)
Feruloyl esterase {ECO:0000313|EMBL:CAM02641.1}; EC=3.1.1.73 {ECO:0000313|EMBL:CAM02641.1};; Putative transposase {ECO:0000313|EMBL:CAM01880.1}; EC=3.1.1.73 {ECO:0000313|EMBL:CAM02906.1};; TaxID=405948 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;"
Transposase n=3 Tax=Saccharopolyspora erythraea (strain NRRL 23338) RepID=A4FBU5_SACEN
SCNpilot_cont_1000_bf_scaffold_731_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16049..17269
DNA (1221bp) protein (407aa)
Transposase IS4 family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6H7_PSEUX
transposase IS4 family protein
Transposase IS4 family protein {ECO:0000313|EMBL:AEA28871.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_bf_scaffold_731_17
unknown

Not on your lists

17428..17547
DNA (120bp) protein (40aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_731_18

Not on your lists

17658..18812
DNA (1155bp) protein (385aa)
ThrC; threonine synthase (EC:4.2.3.1); K01733 threonine synthase [EC:4.2.3.1]
Uncharacterized protein {ECO:0000313|EMBL:KKR60778.1}; TaxID=1618817 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_37.;"
Threonine synthase id=4424807 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Methanotorris taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
SCNpilot_cont_1000_bf_scaffold_731_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19679..20131)
DNA (453bp) protein (151aa)
IstB domain protein ATP-binding protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CK48_PSEUX
IstB domain-containing protein ATP-binding protein
IstB domain protein ATP-binding protein {ECO:0000313|EMBL:AEA28154.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_bf_scaffold_731_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20507..22054)
DNA (1548bp) protein (516aa)
Integrase catalytic region n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CK87_PSEUX rbh
integrase catalytic subunit rbh
Integrase catalytic region {ECO:0000313|EMBL:AEA28155.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Displaying 20 items

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