name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_1000_bf_scaffold_523_1
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(91..1053)
|
VacJ-like lipoprotein n=2 Tax=Novosphingobium nitrogenifigens RepID=F1Z7H9_9SPHN
rbh
VacJ lipoprotein {ECO:0000313|EMBL:GAO55500.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
vacJ; surface lipoprotein; K04754 lipoprotein
|
|
SCNpilot_cont_1000_bf_scaffold_523_2
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1050..1643)
|
Hopanoid biosynthesis associated membrane protein HpnM n=1 Tax=Novosphingobium nitrogenifigens RepID=UPI0003050332
Uncharacterized protein {ECO:0000313|EMBL:GAO55499.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Hopanoid biosynthesis associated membrane protein HpnM
|
|
SCNpilot_cont_1000_bf_scaffold_523_3
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1799..2764
|
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
rbh
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7H6_9SPHN
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_523_4
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2773..3918
|
radical SAM protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CA105
rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO40249.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
Fe-S oxidoreductase
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_523_5
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3928..4554)
|
hypothetical protein n=1 Tax=Novosphingobium nitrogenifigens RepID=UPI0003776DB5
Uncharacterized protein {ECO:0000313|EMBL:GAO40250.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hopanoid-associated phosphorylase
|
|
SCNpilot_cont_1000_bf_scaffold_523_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4551..6488)
|
Squalene--hopene cyclase {ECO:0000313|EMBL:GAO55496.1}; EC=5.4.99.17 {ECO:0000313|EMBL:GAO55496.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Squalene hopene cyclase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7H4_9SPHN
rbh
squalene-hopene cyclase
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_523_7
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6498..7754)
|
hypothetical protein n=1 Tax=Novosphingobium nitrogenifigens RepID=UPI000318B9D6
rbh
Phytoene desaturase {ECO:0000313|EMBL:GAO55495.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
squalene-associated FAD-dependent desaturase
|
|
SCNpilot_cont_1000_bf_scaffold_523_8
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7751..8575)
|
Phytoene synthase {ECO:0000313|EMBL:GAO55494.1}; EC=2.5.1.32 {ECO:0000313|EMBL:GAO55494.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
phytoene synthase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CA0FF
rbh
squalene synthase HpnD
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_523_9
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8572..9396)
|
Squalene synthase HpnC n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7H1_9SPHN
rbh
Squalene synthase HpnC {ECO:0000313|EMBL:EGD59483.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
squalene synthase HpnC
|
|
SCNpilot_cont_1000_bf_scaffold_523_10
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9393..9812)
|
Phytoene synthase {ECO:0000313|EMBL:GAO55492.1}; EC=2.5.1.32 {ECO:0000313|EMBL:GAO55492.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
glycosyl transferase family 2 n=1 Tax=Sphingomonas echinoides RepID=UPI00026CA0FD
hopene-associated glycosyltransferase HpnB
|
|
SCNpilot_cont_1000_bf_scaffold_523_11
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9836..10327)
|
Phytoene synthase {ECO:0000313|EMBL:GAO55492.1}; EC=2.5.1.32 {ECO:0000313|EMBL:GAO55492.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
Hopene-associated glycosyltransferase HpnB n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7H0_9SPHN
hopene-associated glycosyltransferase HpnB
|
|
SCNpilot_cont_1000_bf_scaffold_523_12
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10324..11328)
|
Dihydroflavonol-4-reductase {ECO:0000313|EMBL:GAO55491.1}; EC=1.1.1.219 {ECO:0000313|EMBL:GAO55491.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
NAD-dependent dehydratase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CA0FB
rbh
hopanoid-associated sugar epimerase
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_523_13
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11375..12541
|
Ceramide glucosyltransferase {ECO:0000313|EMBL:GAO55490.1}; EC=2.4.1.80 {ECO:0000313|EMBL:GAO55490.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hopanoid biosynthesis associated glycosyl transferase HpnI n=1 Tax=Sphingomonas echinoides RepID=UPI00026CA0FA
rbh
hopanoid biosynthesis associated glycosyl transferase protein HpnI
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_523_14
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12538..13983
|
radical SAM protein n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI0002881EB0
rbh
Fe-S oxidoreductase {ECO:0000313|EMBL:GAO55489.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hopanoid biosynthesis associated radical SAM protein HpnJ
|
|
SCNpilot_cont_1000_bf_scaffold_523_15
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13989..14819
|
Hopanoid biosynthesis associated protein HpnK n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7G6_9SPHN
rbh
Cellobiose phosphotransferase system celC {ECO:0000313|EMBL:GAO55488.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hopanoid biosynthesis associated protein HpnK
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_523_16
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14830..15738
|
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CA0F6
Uncharacterized protein {ECO:0000313|EMBL:GAO55487.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_523_17
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15855..16724
|
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7G4_9SPHN
rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO55486.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
|
|
SCNpilot_cont_1000_bf_scaffold_523_18
unknown
|
Not on your lists |
comp(16620..16847)
|
This feature has no annotations |
|
SCNpilot_cont_1000_bf_scaffold_523_19
Acidomonas methanolica, Acidomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16834..19158)
|
nitric oxide reductase; K04561 nitric oxide reductase subunit B [EC:1.7.2.5]
Nitric oxide reductase n=1 Tax=Burkholderia pseudomallei (strain 668) RepID=A3NL34_BURP6
Nitric oxide reductase subunit B {ECO:0000313|EMBL:GAJ30419.1}; TaxID=1231351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidomonas.;" source="Acidomonas methanolica NBRC 104435.;"
|
|
SCNpilot_cont_1000_bf_scaffold_523_20
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19195..19671)
|
hypothetical protein n=1 Tax=Acetobacter pasteurianus RepID=UPI0002FC405A
Uncharacterized protein {ECO:0000313|EMBL:EAQ36338.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
|
|
SCNpilot_cont_1000_bf_scaffold_523_21
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19758..20036
|
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002D8A282
Uncharacterized protein {ECO:0000313|EMBL:KJS08198.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
hypothetical protein
|
|
SCNpilot_cont_1000_bf_scaffold_523_22
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20163..20432
|
TonB-dependent receptor n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WHE8_9SPHN
TonB-dependent receptor {ECO:0000313|EMBL:KGB58680.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
TonB-dependent receptor
|
|
SCNpilot_cont_1000_bf_scaffold_523_23
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20639..20848
|
Uncharacterized protein {ECO:0000313|EMBL:KFG89459.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovorans (strain ATCC 700291 / DSM 11019 / NBRC; 16415 / MH) (Sphingomonas herbicidovorans).;"
|
|
SCNpilot_cont_1000_bf_scaffold_523_24
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20900..21175
|
Uncharacterized protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MW85_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:CCW19558.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
hypothetical protein
|
|
SCNpilot_cont_1000_bf_scaffold_523_25
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21206..22333)
|
Glycosidase related protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4RYJ9_9SPHN
rbh
Glycosidase {ECO:0000313|EMBL:AJP74139.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
glycosidase related protein
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_523_26
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22330..22578)
|
Short-chain dehydrogenase/reductase SDR n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SKM0_9SPHN
Short-chain dehydrogenase {ECO:0000313|EMBL:KKC24792.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
short-chain dehydrogenase/reductase SDR
|
|
SCNpilot_cont_1000_bf_scaffold_523_27
Bordetella parapertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22618..23109)
|
Uncharacterized protein n=1 Tax=Bordetella parapertussis (strain Bpp5) RepID=K0MA81_BORPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCJ51002.1}; TaxID=1208660 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella parapertussis (strain Bpp5).;"
|
|
SCNpilot_cont_1000_bf_scaffold_523_28
Dialister micraerophilus, Dialister, Selenomonadales, Negativicutes, Firmicutes, Bacteria
|
Not on your lists |
comp(23663..24931)
|
Transporter, major facilitator family protein n=1 Tax=Dialister microaerophilus UPII 345-E RepID=E4L9D2_9FIRM
rbh
Transporter, major facilitator family protein {ECO:0000313|EMBL:EFR42458.1}; TaxID=910314 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Dialister.;" source="Dialister microaerophilus UPII 345-E.;"
Major facilitator protein
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_523_29
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24962..26284)
|
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003668AAB
rbh
Guanine deaminase {ECO:0000313|EMBL:EHL96687.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
|
|
SCNpilot_cont_1000_bf_scaffold_523_30
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26411..28393)
|
Myosin-cross-reactive antigen n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S707_9SPHN
rbh
myosin-cross-reactive antigen
rbh
Myosin-cross-reactive antigen {ECO:0000313|EMBL:AGH50723.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
|