ggKbase home page

SCNpilot_cont_1000_bf_scaffold_115

Search features with annotation key words

Displaying items 1-30 of 326 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_115_1
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(131..1318)
DNA (1188bp) protein (396aa)
Integrase catalytic region n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6S8I4_INTC7 rbh
Uncharacterized protein {ECO:0000313|EMBL:KHK96567.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
integrase catalytic subunit rbh
SCNpilot_cont_1000_bf_scaffold_115_2
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2174..3064
DNA (891bp) protein (297aa)
Dyp-type peroxidase family n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XJM6_NAKMY rbh
dyp-type peroxidase family protein; K07223 putative iron-dependent peroxidase rbh
Dyp-type peroxidase family {ECO:0000313|EMBL:ACV80587.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_1000_bf_scaffold_115_3
Propionibacterium freudenreichii, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3220..3510)
DNA (291bp) protein (97aa)
Ferredoxin-like protein fixX n=1 Tax=Propionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / CIP 103027 / CIRM-BIA1) RepID=D7GI50_PROFC
fixX; Ferredoxin-like protein fixX; K03855 ferredoxin like protein
Ferredoxin-like protein fixX {ECO:0000313|EMBL:CBL55772.1}; TaxID=754252 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 /; CIP 103027 / CIRM-BIA1).;"
SCNpilot_cont_1000_bf_scaffold_115_4
BJP_08E140C01_Actinomycetales_70_11, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(3519..4820)
DNA (1302bp) protein (434aa)
fixC; electron transfer flavoprotein FixC (EC:1.5.5.-); K00313 electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-]
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00036451AE
Tax=BJP_08E140C01_Actinomycetales_70_11
SCNpilot_cont_1000_bf_scaffold_115_5
BJP_08E140C01_Actinomycetales_70_11, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(4894..6369)
DNA (1476bp) protein (492aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI0003700D6A
putative_tetrahydrodaidzein_reductase
Tax=BJP_08E140C01_Actinomycetales_70_11
SCNpilot_cont_1000_bf_scaffold_115_6
BJP_08E140C01_Actinomycetales_70_11, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(6366..7169)
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00036080F4
Tax=BJP_08E140C01_Actinomycetales_70_11
SCNpilot_cont_1000_bf_scaffold_115_7
BJP_08E140C01_Actinomycetales_70_11, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(7166..7897)
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00035D278A
electron transfer flavoprotein beta subunit
Tax=BJP_08E140C01_Actinomycetales_70_11
SCNpilot_cont_1000_bf_scaffold_115_8
BJP_08E140C01_Actinomycetales_70_11, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(8107..8763)
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00037FBD32
LuxR transcriptional regulator
Tax=BJP_08E140C01_Actinomycetales_70_11
SCNpilot_cont_1000_bf_scaffold_115_9
BJP_08E140C01_Actinomycetales_70_11, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(8768..10138)
DNA (1371bp) protein (457aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI0003693D6C
putative two component system histidine kinase
Tax=BJP_08E140C01_Actinomycetales_70_11
SCNpilot_cont_1000_bf_scaffold_115_10
Mobilicoccus pelagius, Mobilicoccus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10155..11093)
DNA (939bp) protein (313aa)
transcriptional regulator n=1 Tax=Serinicoccus profundi RepID=UPI000255F506 rbh
Putative LysR family transcriptional regulator {ECO:0000313|EMBL:GAB47410.1}; TaxID=1089455 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Mobilicoccus.;" source="Mobilicoccus pelagius NBRC 104925.;"
LysR family transcriptional regulator rbh
SCNpilot_cont_1000_bf_scaffold_115_11
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11239..12210
DNA (972bp) protein (324aa)
Aminotransferase class V n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4H1Q7_CELFA
class V aminotransferase
Aminotransferase class V {ECO:0000313|EMBL:AEE47477.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
SCNpilot_cont_1000_bf_scaffold_115_12
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12391..12567
DNA (177bp) protein (59aa)
copper-translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4]
Copper-translocating P-type ATPase n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A2U2_CELGA
Copper-translocating P-type ATPase {ECO:0000313|EMBL:AEI10659.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_1000_bf_scaffold_115_13
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12575..14941
DNA (2367bp) protein (789aa)
Copper-translocating P-type ATPase n=1 Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UE59_CELFN
ATPase P {ECO:0000313|EMBL:EYR63755.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
copper-translocating P-type ATPase
SCNpilot_cont_1000_bf_scaffold_115_14
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15015..15770
DNA (756bp) protein (252aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SBI6_INTC7
transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ADU49514.1}; Flags: Precursor;; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
SCNpilot_cont_1000_bf_scaffold_115_15
BJP_08E140C01_Actinomycetales_70_11, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(15772..16971)
DNA (1200bp) protein (400aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SBI5_INTC7
integral membrane sensor signal transduction histidine kinase
Tax=BJP_08E140C01_Actinomycetales_70_11
SCNpilot_cont_1000_bf_scaffold_115_16
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17042..17290)
DNA (249bp) protein (83aa)
Putative uncharacterized protein n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SBI8_INTC7
hypothetical protein; K08982 putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:ADU49516.1}; Flags: Precursor;; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
SCNpilot_cont_1000_bf_scaffold_115_17
Gordonia polyisoprenivorans, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17447..18058)
DNA (612bp) protein (204aa)
Putative uncharacterized protein n=1 Tax=Gordonia polyisoprenivorans NBRC 16320 RepID=H0RMA3_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:GAB26204.1}; TaxID=1077976 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia polyisoprenivorans NBRC 16320 = JCM 10675.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_115_18
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18067..18315)
DNA (249bp) protein (83aa)
Putative uncharacterized protein n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SBI8_INTC7
hypothetical protein; K08982 putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:ADU49516.1}; Flags: Precursor;; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
SCNpilot_cont_1000_bf_scaffold_115_19
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18537..19271)
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TES6_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ERK73197.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
integral membrane protein
SCNpilot_cont_1000_bf_scaffold_115_20
Nocardia asteroides, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19473..20402)
DNA (930bp) protein (310aa)
Putative LysR family transcriptional regulator n=1 Tax=Nocardia asteroides NBRC 15531 RepID=U5EN24_NOCAS
Putative LysR family transcriptional regulator {ECO:0000313|EMBL:GAD86494.1}; TaxID=1110697 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia asteroides NBRC 15531.;"
Transcriptional regulator, LysR family
SCNpilot_cont_1000_bf_scaffold_115_21
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20473..21540
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Sciscionella marina RepID=UPI00037B8411
Uncharacterized protein {ECO:0000313|EMBL:KGM15576.1}; Flags: Fragment;; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_115_22
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21779..22540
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Promicromonospora sukumoe RepID=UPI0003650145 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ63395.1}; TaxID=326424 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
SCNpilot_cont_1000_bf_scaffold_115_23
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22620..25268
DNA (2649bp) protein (883aa)
Glycoside hydrolase, family 63 protein n=1 Tax=Actinoplanes sp. N902-109 RepID=R4L8Q3_9ACTO rbh
Glycoside hydrolase, family 63 protein {ECO:0000313|EMBL:AGL15822.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
Glycoside hydrolase, family 63 protein rbh
SCNpilot_cont_1000_bf_scaffold_115_24
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25332..27290
DNA (1959bp) protein (653aa)
potassium transporter Kup n=1 Tax=Aestuariimicrobium kwangyangense RepID=UPI0003B69F07 rbh
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
kup; putative potassium transport system protein kup rbh
SCNpilot_cont_1000_bf_scaffold_115_25
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27125..27571)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Amycolatopsis azurea DSM 43854 RepID=M2PQB2_9PSEU
Major facilitator superfamily MFS1 {ECO:0000313|EMBL:CCH80353.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
major facilitator superfamily protein
SCNpilot_cont_1000_bf_scaffold_115_26
unknown

Not on your lists

27608..27790
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_115_27
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28080..30611
DNA (2532bp) protein (844aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 RepID=L1PH48_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:ETK36806.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
glycosyl hydrolase family 98 putative carbohydrate binding module rbh
SCNpilot_cont_1000_bf_scaffold_115_28
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30638..31939
DNA (1302bp) protein (434aa)
ABC transporter, solute-binding protein n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 RepID=L1PHY3_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:ETK36805.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
ABC transporter substrate-binding protein; K02027 multiple sugar transport system substrate-binding protein rbh
SCNpilot_cont_1000_bf_scaffold_115_29
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31939..32886
DNA (948bp) protein (316aa)
ABC transporter, permease protein n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 RepID=L1PHA1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ETK36804.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
binding-protein-dependent transporters inner membrane component; K02025 multiple sugar transport system permease protein
SCNpilot_cont_1000_bf_scaffold_115_30
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32879..33739
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003066544 rbh
Sugar ABC transporter permease {ECO:0000313|EMBL:ETK36803.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
binding-protein-dependent transport system inner membrane protein; K02026 multiple sugar transport system permease protein
Displaying items 1-30 of 326 in total

View Taxonomy