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SCNpilot_cont_1000_bf_scaffold_140

Search features with annotation key words

Displaying items 1-30 of 143 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_140_1
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..799)
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI000382C456 rbh
Carbohydrate ABC transporter substrate-binding protein, CUT1 family {ECO:0000313|EMBL:EXG82973.1}; Flags: Precursor;; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
family 1 extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein
SCNpilot_cont_1000_bf_scaffold_140_2
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1037..1774
DNA (738bp) protein (246aa)
Transcriptional regulator, DeoR family n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=G8XFM9_STREN
Transcriptional regulator of sugar metabolism {ECO:0000313|EMBL:EXG82972.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
transcriptional regulator, DeoR family
SCNpilot_cont_1000_bf_scaffold_140_3
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1849..3159
DNA (1311bp) protein (437aa)
Alpha-galactosidase n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LQT8_9ACTO
alpha-galactosidase
Alpha-galactosidase {ECO:0000313|EMBL:AGL18049.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
SCNpilot_cont_1000_bf_scaffold_140_4
Serratia fonticola, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3232..4179
DNA (948bp) protein (316aa)
Fructokinase n=1 Tax=Serratia fonticola AU-P3(3) RepID=U2LXE5_SERFO
Fructokinase {ECO:0000313|EMBL:ERK08871.1}; TaxID=1332070 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia fonticola AU-P3(3).;"
ribokinase-like domain-containing protein
SCNpilot_cont_1000_bf_scaffold_140_5
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4203..5354)
DNA (1152bp) protein (384aa)
Short-chain dehydrogenase/reductase (SDR) family protein (EC:1.1.1.-)
Short-chain dehydrogenase/reductase (SDR) family protein n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F0B0_MODMB
Short-chain dehydrogenase {ECO:0000313|EMBL:ETK33652.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
SCNpilot_cont_1000_bf_scaffold_140_6
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5460..6452
DNA (993bp) protein (331aa)
RNA polymerase sigma factor sigW n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F0A9_MODMB rbh
sigW; RNA polymerase sigma factor sigW rbh
RNA polymerase sigma factor sigW {ECO:0000313|EMBL:CCH89072.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
SCNpilot_cont_1000_bf_scaffold_140_7
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6510..7277)
DNA (768bp) protein (256aa)
Dehydrogenase n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VY53_9ACTO rbh
dehydrogenase rbh
Dehydrogenase {ECO:0000313|EMBL:AGZ41712.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
SCNpilot_cont_1000_bf_scaffold_140_8
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7274..7954)
DNA (681bp) protein (227aa)
Fructose transport system kinase n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W1D1_9ACTO
Nucleoside triphosphate hydrolase {ECO:0000313|EMBL:EYR64615.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
fructose transport system kinase
SCNpilot_cont_1000_bf_scaffold_140_9
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7941..8777)
DNA (837bp) protein (279aa)
ABC transporter n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W175_9ACTO rbh
ABC transporter rbh
ABC transporter {ECO:0000313|EMBL:AGZ41710.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
SCNpilot_cont_1000_bf_scaffold_140_10
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8774..9784)
DNA (1011bp) protein (337aa)
Sugar ABC transporter permease n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VXV6_9ACTO rbh
sugar ABC transporter permease rbh
Sugar ABC transporter permease {ECO:0000313|EMBL:AGZ41709.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
SCNpilot_cont_1000_bf_scaffold_140_11
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9781..10812)
DNA (1032bp) protein (344aa)
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VXK9_9ACTO rbh
periplasmic binding protein/LacI transcriptional regulator rbh
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:AGZ41708.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
SCNpilot_cont_1000_bf_scaffold_140_12
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10955..12163
DNA (1209bp) protein (403aa)
ROK family protein n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VY48_9ACTO rbh
ROK family protein rbh
ROK family protein {ECO:0000313|EMBL:AGZ41707.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
SCNpilot_cont_1000_bf_scaffold_140_13
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12293..12946)
DNA (654bp) protein (218aa)
Class II aldolase/adducin family protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SDQ6_NOCSJ
Aldolase {ECO:0000313|EMBL:EYR62287.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
class II aldolase/adducin family protein
SCNpilot_cont_1000_bf_scaffold_140_14
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12946..13830)
DNA (885bp) protein (295aa)
Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SDQ7_NOCSJ rbh
Autoinducer 2 aldolase {ECO:0000313|EMBL:EYR62286.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
aldolase rbh
SCNpilot_cont_1000_bf_scaffold_140_15
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13855..14244)
DNA (390bp) protein (130aa)
Cupin 2, conserved barrel domain protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SDQ8_NOCSJ
Polyketide synthase {ECO:0000313|EMBL:EYR62285.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
cupin
SCNpilot_cont_1000_bf_scaffold_140_16
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14262..16220)
DNA (1959bp) protein (653aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SDQ9_NOCSJ rbh
short chain dehydrogenase rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABL79944.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
SCNpilot_cont_1000_bf_scaffold_140_17
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16448..17164)
DNA (717bp) protein (239aa)
Transcriptional regulator, GntR family n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SDR0_NOCSJ rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:EYR63411.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
GntR family transcriptional regulator; K03710 GntR family transcriptional regulator rbh
SCNpilot_cont_1000_bf_scaffold_140_18
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17327..18364
DNA (1038bp) protein (346aa)
Methylthioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; Short=M1Pi {ECO:0000256|HAMAP-Rule:MF_01678};; Short=MTR-1-P isomerase {ECO:0000256|HAMAP-Rule:MF_01678};; EC=5.3.1.23 {ECO:0000256|HAMAP-Rule:MF_01678};; S-methyl-5-thioribose-1-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01678}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
translation initiation factor 2B subunit I (EC:5.3.1.23); K08963 methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
Methylthioribose-1-phosphate isomerase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SDR1_NOCSJ
SCNpilot_cont_1000_bf_scaffold_140_19
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18407..19516
DNA (1110bp) protein (370aa)
Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SDR2_NOCSJ
putative sugar ABC transporter, substrate-binding protein
Monosaccharide ABC transporter substrate-binding protein, CUT2 family {ECO:0000313|EMBL:ABL79947.1}; Flags: Precursor;; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
SCNpilot_cont_1000_bf_scaffold_140_20
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19597..21147
DNA (1551bp) protein (517aa)
Monosaccharide ABC transporter ATP-binding protein, CUT2 family n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SDR3_NOCSJ
Uncharacterized protein {ECO:0000313|EMBL:EYR63408.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
ABC transporter-like protein
SCNpilot_cont_1000_bf_scaffold_140_21
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21148..22233
DNA (1086bp) protein (362aa)
Monosaccharide ABC transporter membrane protein, CUT2 family n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SDR4_NOCSJ rbh
Sugar ABC transporter permease {ECO:0000313|EMBL:EYR63407.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
inner-membrane translocator rbh
SCNpilot_cont_1000_bf_scaffold_140_22
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22255..23481
DNA (1227bp) protein (409aa)
Methylthioribose kinase {ECO:0000256|HAMAP-Rule:MF_01683}; Short=MTR kinase {ECO:0000256|HAMAP-Rule:MF_01683};; EC=2.7.1.100 {ECO:0000256|HAMAP-Rule:MF_01683};; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
mtnK; methylthioribose kinase (EC:2.7.1.100); K00899 5-methylthioribose kinase [EC:2.7.1.100]
Methylthioribose kinase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SDR5_NOCSJ
SCNpilot_cont_1000_bf_scaffold_140_23
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23484..23906
DNA (423bp) protein (141aa)
transport protein RbsD/FucU; K02431 L-fucose mutarotase [EC:5.1.3.-]
RbsD or FucU transport n=1 Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7C7T7_STRBB
Ribose ABC transporter {ECO:0000313|EMBL:EYR63405.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
SCNpilot_cont_1000_bf_scaffold_140_24
unknown

Not on your lists

24153..24443
DNA (291bp) protein (97aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_140_25
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24542..25300)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JRL0_STREN rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEW97896.1}; TaxID=1003195 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC; 14057 / NRRL 8057).;"
SCNpilot_cont_1000_bf_scaffold_140_26
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25350..26045
DNA (696bp) protein (232aa)
SufR family transcriptional regulator n=1 Tax=Rhodococcus opacus M213 RepID=K8XPC0_RHOOP
Regulatory protein ArsR {ECO:0000313|EMBL:EWM19195.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
SufR family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_140_27
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26207..26680
DNA (474bp) protein (158aa)
Hemerythrin HHE cation binding domain protein n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SCT1_INTC7
hemerythrin HHE cation binding domain protein
Hemerythrin HHE cation binding domain protein {ECO:0000313|EMBL:ADU47486.1}; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
SCNpilot_cont_1000_bf_scaffold_140_28
Streptomyces pluripotens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26707..27495)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Gordonia rhizosphera NBRC 16068 RepID=K6VT82_9ACTO
ABC transporter permease {ECO:0000313|EMBL:KIE39444.1}; TaxID=1355015 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pluripotens.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_140_29
Streptomyces pluripotens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27497..28405)
DNA (909bp) protein (303aa)
Putative transport ATP-binding protein n=1 Tax=Rhodococcus triatomae BKS 15-14 RepID=M2XKJ0_9NOCA rbh
Transport ATP-binding protein {ECO:0000313|EMBL:KIE39443.1}; TaxID=1355015 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pluripotens.;"
putative transport ATP-binding protein; K09687 antibiotic transport system ATP-binding protein
SCNpilot_cont_1000_bf_scaffold_140_30
Streptomyces pluripotens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28408..29043)
DNA (636bp) protein (212aa)
Transcriptional regulator, TetR family n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X7L5_NAKMY
Uncharacterized protein {ECO:0000313|EMBL:KIE39442.1}; TaxID=1355015 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pluripotens.;"
TetR family transcriptional regulator
Displaying items 1-30 of 143 in total

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