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SCNpilot_cont_1000_bf_scaffold_277

Search features with annotation key words

Displaying items 1-30 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_277_1
unknown

Not on your lists

comp(61..330)
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_277_2
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

506..1558
DNA (1053bp) protein (351aa)
LacI family transcription regulator n=1 Tax=Humibacter albus RepID=UPI0003B44531 rbh
LacI family transcription regulator {ECO:0000313|EMBL:ETK35135.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
LacI family transcriptional regulator rbh
SCNpilot_cont_1000_bf_scaffold_277_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1414..2814)
DNA (1401bp) protein (467aa)
Integrase catalytic region n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJX3_PSEUX rbh
integrase catalytic subunit rbh
Integrase catalytic region {ECO:0000313|EMBL:AEA26998.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_bf_scaffold_277_4
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3071..3301
DNA (231bp) protein (77aa)
Transposase IS3/IS911 family protein n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A0J0_CELGA
transposase IS3/IS911 family protein
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:AEI12675.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
SCNpilot_cont_1000_bf_scaffold_277_5
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3429..4106
DNA (678bp) protein (226aa)
Integrase catalytic region n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A3J5_CELGA
Integrase {ECO:0000313|EMBL:KGM08441.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
Integrase catalytic region
SCNpilot_cont_1000_bf_scaffold_277_6
unknown

Not on your lists

comp(4116..4358)
DNA (243bp) protein (81aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_277_7
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4483..5412)
DNA (930bp) protein (310aa)
fructokinase (EC:2.7.1.4); K00847 fructokinase [EC:2.7.1.4]
Ribokinase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RIX5_9ACTO
Ribokinase {ECO:0000313|EMBL:KGM15870.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
SCNpilot_cont_1000_bf_scaffold_277_8
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5409..6407)
DNA (999bp) protein (333aa)
Putative LacI family transcriptional regulator n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KXB9_OSCVS
putative LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
Putative LacI family transcriptional regulator {ECO:0000313|EMBL:BAL00928.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
SCNpilot_cont_1000_bf_scaffold_277_9
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6422..8515)
DNA (2094bp) protein (698aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0N9L0_CLOSV rbh
Uncharacterized protein {ECO:0000313|EMBL:EDS08803.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
SCNpilot_cont_1000_bf_scaffold_277_10
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8512..9318)
DNA (807bp) protein (269aa)
ABC transporter, permease protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0N9L6_CLOSV rbh
ABC transporter, permease protein {ECO:0000313|EMBL:EDS08809.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
ABC-type sugar transport system, permease component
SCNpilot_cont_1000_bf_scaffold_277_11
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9321..10217)
DNA (897bp) protein (299aa)
ABC transporter, permease protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0N9L5_CLOSV rbh
ABC transporter, permease protein {ECO:0000313|EMBL:EDS08808.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
ABC-type sugar transport systems, permease components rbh
SCNpilot_cont_1000_bf_scaffold_277_12
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10319..11608)
DNA (1290bp) protein (430aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LVV0_9FIRM rbh
ABC-type sugar transport system, periplasmic component rbh
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:CBL21753.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
SCNpilot_cont_1000_bf_scaffold_277_13
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11656..13008)
DNA (1353bp) protein (451aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LVU9_9FIRM rbh
Protein of unknown function (DUF2961). rbh
Uncharacterized protein {ECO:0000313|EMBL:CBL21752.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
SCNpilot_cont_1000_bf_scaffold_277_14
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13761..16679)
DNA (2919bp) protein (973aa)
hypothetical protein n=1 Tax=Nocardiopsis sp. CNS639 RepID=UPI0003771869 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGM11891.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
Peptidoglycan-binding LysM rbh
SCNpilot_cont_1000_bf_scaffold_277_15
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16676..17119)
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Streptomyces canus RepID=UPI0003760211
Uncharacterized protein {ECO:0000313|EMBL:KGM17916.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_277_16
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17116..17541)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI000373D9F9
Membrane protein {ECO:0000313|EMBL:KGM12784.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
TadE-like protein
SCNpilot_cont_1000_bf_scaffold_277_17
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17538..17951)
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Streptomyces RepID=UPI00037AE89E
Uncharacterized protein {ECO:0000313|EMBL:KGM12783.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
TadE family protein
SCNpilot_cont_1000_bf_scaffold_277_18
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17951..18151)
DNA (201bp) protein (67aa)
Uncharacterized protein {ECO:0000313|EMBL:KGM12819.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
SCNpilot_cont_1000_bf_scaffold_277_19
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18164..19063)
DNA (900bp) protein (300aa)
Type II secretion system F domain protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S7F0_GEOOG
Type II secretion protein F {ECO:0000313|EMBL:EYR65233.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
Type II secretion system F domain-containing protein
SCNpilot_cont_1000_bf_scaffold_277_20
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19060..19923)
DNA (864bp) protein (288aa)
Type II secretion system F domain protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S7E9_GEOOG
Membrane protein {ECO:0000313|EMBL:EYR65234.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
Type II secretion system F domain-containing protein
SCNpilot_cont_1000_bf_scaffold_277_21
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19920..21359)
DNA (1440bp) protein (480aa)
Flp pilus assembly protein, ATPase CpaF n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RKJ3_BLASD rbh
ATP/GTP-binding protein {ECO:0000313|EMBL:KGM03925.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
Flp pilus assembly protein, ATPase CpaF rbh
SCNpilot_cont_1000_bf_scaffold_277_22
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21356..22123)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4N1Z8_KITSK
Uncharacterized protein {ECO:0000313|EMBL:KGM11878.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_277_23
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22120..22797)
DNA (678bp) protein (226aa)
Putative uncharacterized protein n=1 Tax=Streptomyces sp. Mg1 RepID=B4UZR8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KGM12779.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_277_24
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22838..23641)
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Salinispora arenicola RepID=UPI00036D90BB
ATP/GTP-binding protein {ECO:0000313|EMBL:EYR65238.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
putative ATP/GTP-binding protein
SCNpilot_cont_1000_bf_scaffold_277_25
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23734..24339)
DNA (606bp) protein (202aa)
Putative secreted protein/lipoprotein n=1 Tax=Streptomyces zinciresistens K42 RepID=G2G440_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EYR65239.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
SCNpilot_cont_1000_bf_scaffold_277_26
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24544..25410)
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI000370D712
Uncharacterized protein {ECO:0000313|EMBL:EYR65314.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
SCNpilot_cont_1000_bf_scaffold_277_27
unknown

Not on your lists

25855..26127
DNA (273bp) protein (91aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_277_28
Mycobacterium llatzerense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26297..27244
DNA (948bp) protein (316aa)
Putative uncharacterized protein n=1 Tax=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) RepID=A1T9X9_MYCVP
Mycobacterium llatzerense strain CLUC14 Mllat_contig000095, whole genome shotgun sequence {ECO:0000313|EMBL:KIU13545.1}; TaxID=280871 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium llatzerense.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_277_29
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27666..27863
DNA (198bp) protein (66aa)
Uncharacterized protein {ECO:0000313|EMBL:EYR62729.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
SCNpilot_cont_1000_bf_scaffold_277_trna_1
unknown

Not on your lists

comp(27934..28005)
DNA (72bp)
transferRNA
Displaying items 1-30 of 91 in total

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