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SCNpilot_cont_1000_bf_scaffold_486

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_486_1
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

193..969
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI000368CED5
Uncharacterized protein {ECO:0000313|EMBL:KGM17910.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
integral membrane protein
SCNpilot_cont_1000_bf_scaffold_486_2
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

966..1844
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI00037732DD
ATP-binding protein {ECO:0000313|EMBL:EYR65222.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_486_3
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1841..2053
DNA (213bp) protein (71aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI0003610B42
ATP-binding protein {ECO:0000313|EMBL:EYR65222.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
ATP/GTP-binding protein
SCNpilot_cont_1000_bf_scaffold_486_4
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2053..3150
DNA (1098bp) protein (366aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI0003805C1A
Uncharacterized protein {ECO:0000313|EMBL:EYR65310.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
replicative DNA helicase
SCNpilot_cont_1000_bf_scaffold_486_5
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3147..4952
DNA (1806bp) protein (602aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI00037D7C1B rbh
Type VI secretion protein {ECO:0000313|EMBL:KGM17907.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_486_6
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4949..5677
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI00037F746D
Uncharacterized protein {ECO:0000313|EMBL:KGM17906.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
SCNpilot_cont_1000_bf_scaffold_486_7
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5680..6681
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI000360144D
Uncharacterized protein {ECO:0000313|EMBL:EYR65220.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_486_8
unknown

Not on your lists

comp(6718..6933)
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Ruania albidiflava RepID=UPI0003B6C6BC
SCNpilot_cont_1000_bf_scaffold_486_9
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7018..8220)
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Leifsonia rubra CMS 76R RepID=S7W3M0_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KGM00730.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
SCNpilot_cont_1000_bf_scaffold_486_10
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9240..9611)
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI0003649A37
Uncharacterized protein {ECO:0000313|EMBL:EYR65216.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_486_11
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9623..13171)
DNA (3549bp) protein (1183aa)
hypothetical protein n=1 Tax=Kribbella catacumbae RepID=UPI00037B497C rbh
Conjugal transfer protein {ECO:0000313|EMBL:EYR65215.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
conjugative relaxase domain-containing protein
SCNpilot_cont_1000_bf_scaffold_486_12
Actinotalea ferrariae, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13606..14031
DNA (426bp) protein (142aa)
Uncharacterized protein {ECO:0000313|EMBL:EYR65309.1}; TaxID=948458 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea ferrariae CF5-4.;"
SCNpilot_cont_1000_bf_scaffold_486_13
unknown

Not on your lists

14028..15419
DNA (1392bp) protein (464aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_486_14
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15802..16602)
DNA (801bp) protein (267aa)
Putative IclR family transcriptional regulatory protein n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1M816_RHIL3
IclR family transcriptional regulatory protein
Putative IclR family transcriptional regulatory protein {ECO:0000313|EMBL:CAK10356.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae (strain 3841).;"
SCNpilot_cont_1000_bf_scaffold_486_15
Mycobacterium mageritense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16602..17708)
DNA (1107bp) protein (369aa)
Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=1 Tax=Arthrobacter sp. (strain FB24) RepID=A0JVZ4_ARTS2
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:CDO24342.1}; TaxID=53462 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium mageritense.;"
periplasmic binding protein/LacI transcriptional regulator; K10439 ribose transport system substrate-binding protein
SCNpilot_cont_1000_bf_scaffold_486_16
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17861..18892
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KCI9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EQM80738.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
ABC sugar transporter, periplasmic ligand binding protein; K02058 simple sugar transport system substrate-binding protein
SCNpilot_cont_1000_bf_scaffold_486_17
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18892..20409
DNA (1518bp) protein (506aa)
ABC transporter-like protein; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17]
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KNG4_9MICO
Lipase {ECO:0000313|EMBL:KGM16937.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
SCNpilot_cont_1000_bf_scaffold_486_18
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20406..21488
DNA (1083bp) protein (361aa)
Monosaccharide ABC transporter membrane protein, CUT2 family n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SLY5_NOCSJ
inner-membrane translocator
Monosaccharide ABC transporter membrane protein, CUT2 family {ECO:0000313|EMBL:ABL82820.1}; Flags: Precursor;; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
SCNpilot_cont_1000_bf_scaffold_486_19
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21485..22579
DNA (1095bp) protein (365aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Actinomyces odontolyticus F0309 RepID=D4TZF7_9ACTO
ABC transporter permease {ECO:0000313|EMBL:KGM16935.1}; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
inner-membrane translocator
SCNpilot_cont_1000_bf_scaffold_486_20
Streptomyces sp. Mg1, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22585..23622
DNA (1038bp) protein (346aa)
Oxidoreductase n=1 Tax=Streptomyces sp. Mg1 RepID=B4VB49_9ACTO
Oxidoreductase {ECO:0000313|EMBL:EDX25186.1}; TaxID=465541 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Mg1.;"
Oxidoreductase domain protein
SCNpilot_cont_1000_bf_scaffold_486_21
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23652..24131
DNA (480bp) protein (160aa)
Putative lactoylglutathione lyase n=1 Tax=Clostridium sp. D5 RepID=F0YT77_9CLOT
Putative lactoylglutathione lyase {ECO:0000313|EMBL:EGB94097.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_486_22
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24172..24816)
DNA (645bp) protein (215aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1); K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1]
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000349A601
Uncharacterized protein {ECO:0000313|EMBL:EYT60906.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
SCNpilot_cont_1000_bf_scaffold_486_23
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24813..25790)
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034733BA rbh
Transcriptional regulator {ECO:0000313|EMBL:EYT60499.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
DeoR family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_486_24
Actinomyces turicensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25928..26983
DNA (1056bp) protein (352aa)
ribose/xylose/arabinose/galactoside ABC transporter permease (EC:3.6.3.17); K10440 ribose transport system permease protein
Uncharacterized protein n=1 Tax=Actinomyces turicensis ACS-279-V-Col4 RepID=K0Z064_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EJZ85409.1}; TaxID=883077 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces turicensis ACS-279-V-Col4.;"
SCNpilot_cont_1000_bf_scaffold_486_25
Actinotignum schaalii, Actinotignum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27075..28085
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Actinobaculum schaalii FB123-CNA-2 RepID=S2VKG1_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD27286.1}; TaxID=883067 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinotignum.;" source="Actinotignum schaalii FB123-CNA-2.;"
rbsB; ribose ABC transporter ATP-binding protein; K10439 ribose transport system substrate-binding protein rbh
SCNpilot_cont_1000_bf_scaffold_486_26
Actinotignum schaalii, Actinotignum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28087..29658
DNA (1572bp) protein (524aa)
rbsA; ABC transporter ATP-binding protein (EC:3.6.3.17); K10441 ribose transport system ATP-binding protein [EC:3.6.3.17] rbh
Uncharacterized protein n=1 Tax=Actinobaculum schaalii FB123-CNA-2 RepID=S2W3X6_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD27287.1}; TaxID=883067 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinotignum.;" source="Actinotignum schaalii FB123-CNA-2.;"
SCNpilot_cont_1000_bf_scaffold_486_27
Actinotignum schaalii, Actinotignum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29690..30343
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Actinobaculum schaalii FB123-CNA-2 RepID=S2VIK0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD27288.1}; TaxID=883067 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinotignum.;" source="Actinotignum schaalii FB123-CNA-2.;"
putative sugar phosphate isomerase involved in capsule formation
SCNpilot_cont_1000_bf_scaffold_486_28
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30343..31821
DNA (1479bp) protein (493aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000346DB0F rbh
Xylulose kinase {ECO:0000313|EMBL:EYT60497.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
xylulokinase rbh
SCNpilot_cont_1000_bf_scaffold_486_29
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

31824..32483
DNA (660bp) protein (220aa)
transaldolase; K00616 transaldolase [EC:2.2.1.2]
Transaldolase {ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|SAAS:SAAS00118670};; TaxID=526227 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) (Thermus; silvanus).;"
hypothetical protein n=1 Tax=Meiothermus timidus RepID=UPI00037737BB
SCNpilot_cont_1000_bf_scaffold_486_30
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32532..33416)
DNA (885bp) protein (295aa)
Transcriptional antiterminator, BglG n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XAD4_NAKMY
transcriptional antiterminator BglG; K03488 beta-glucoside operon transcriptional antiterminator
Transcriptional antiterminator, BglG {ECO:0000313|EMBL:ACV77299.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Displaying items 1-30 of 39 in total

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