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SCNpilot_cont_1000_bf_scaffold_225

Search features with annotation key words

Displaying items 1-30 of 375 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_225_1
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..289
DNA (288bp) protein (96aa)
NADH:ubiquinone oxidoreductase subunit 6 (chain J); K00339 NADH-quinone oxidoreductase subunit J [EC:1.6.5.3]
NADH:ubiquinone oxidoreductase subunit 6 (Chain J) n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L5U6_FRAAD
NADH:ubiquinone oxidoreductase subunit J {ECO:0000313|EMBL:KJV36912.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
SCNpilot_cont_1000_bf_scaffold_225_2
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

286..597
DNA (312bp) protein (104aa)
NADH-quinone oxidoreductase subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01456};; NADH dehydrogenase I subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; NDH-1 subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit K n=1 Tax=Rudaea cellulosilytica RepID=UPI0003621063
SCNpilot_cont_1000_bf_scaffold_225_3
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

693..2699
DNA (2007bp) protein (669aa)
NADH dehydrogenase subunit L (EC:1.6.5.3) rbh
Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=mine drainage metagenome RepID=T1BJ97_9ZZZZ rbh
NADH:ubiquinone oxidoreductase subunit L {ECO:0000313|EMBL:KJV36910.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
SCNpilot_cont_1000_bf_scaffold_225_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2835..4346
DNA (1512bp) protein (504aa)
NADH dehydrogenase subunit M (EC:1.6.5.3)
NADH dehydrogenase subunit M {ECO:0000313|EMBL:AGG88617.1}; EC=1.6.5.3 {ECO:0000313|EMBL:AGG88617.1};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
NADH dehydrogenase subunit M n=1 Tax=Rhodanobacter denitrificans RepID=I4WLS8_9GAMM
SCNpilot_cont_1000_bf_scaffold_225_5
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4354..5796
DNA (1443bp) protein (481aa)
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
NADH dehydrogenase subunit N (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit N n=1 Tax=Rhodanobacter sp. 115 RepID=I4VI99_9GAMM
SCNpilot_cont_1000_bf_scaffold_225_6
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5918..7198
DNA (1281bp) protein (427aa)
4-aminobutyrate aminotransferase; K07250 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase [EC:2.6.1.19 2.6.1.22]
4-aminobutyrate aminotransferase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RDM1_PHEZH
4-aminobutyrate aminotransferase {ECO:0000313|EMBL:ACG78411.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
SCNpilot_cont_1000_bf_scaffold_225_7
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7256..9019
DNA (1764bp) protein (588aa)
2-aminoadipate aminotransferase n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003A29724
Uncharacterized protein {ECO:0000313|EMBL:KFL37531.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
GntR family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_225_8
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9123..10034
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Dasania marina RepID=UPI0003697804 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFL37530.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
carbon-nitrogen hydrolase rbh
SCNpilot_cont_1000_bf_scaffold_225_9
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10068..12533
DNA (2466bp) protein (822aa)
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00036A16B6 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFL37529.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
TonB-dependent receptor rbh
SCNpilot_cont_1000_bf_scaffold_225_10
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12537..13928
DNA (1392bp) protein (464aa)
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00037AC251 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFL37528.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_225_11
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13925..15145
DNA (1221bp) protein (407aa)
Major facilitator family transporter, putative n=1 Tax=Luminiphilus syltensis NOR5-1B RepID=B8KTF7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KFL37527.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
major facilitator superfamily transporter
SCNpilot_cont_1000_bf_scaffold_225_12
Thauera sp. MZ1T, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15149..16642
DNA (1494bp) protein (498aa)
succinic semialdehyde dehydrogenase (EC:1.2.1.24); K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
Succinic semialdehyde dehydrogenase {ECO:0000313|EMBL:ACK53207.1}; EC=1.2.1.24 {ECO:0000313|EMBL:ACK53207.1};; TaxID=85643 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. (strain MZ1T).;"
Succinic semialdehyde dehydrogenase n=1 Tax=Thauera sp. (strain MZ1T) RepID=C4ZIS0_THASP
SCNpilot_cont_1000_bf_scaffold_225_13
Arenimonas donghaensis, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16639..18399
DNA (1761bp) protein (587aa)
Uncharacterized protein n=1 Tax=Simiduia agarivorans (strain DSM 21679 / JCM 13881 / BCRC 17597 / SA1) RepID=K4KH01_SIMAS rbh
Uncharacterized protein {ECO:0000313|EMBL:KFL37526.1}; TaxID=1121014 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas donghaensis DSM 18148 = HO3-R19.;"
hypothetical protein rbh
SCNpilot_cont_1000_bf_scaffold_225_14
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18653..19429
DNA (777bp) protein (259aa)
Phenazine biosynthesis protein PhzF family protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4W005_9GAMM
Phenazine biosynthesis protein PhzF family protein {ECO:0000313|EMBL:EIL92796.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
phenazine biosynthesis protein PhzF family
SCNpilot_cont_1000_bf_scaffold_225_15
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19519..19941
DNA (423bp) protein (141aa)
membrane protein n=1 Tax=Pseudomonas stutzeri RepID=UPI000301590F
Membrane protein {ECO:0000313|EMBL:KGM50953.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_225_16
Xanthomonas hortorum, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19938..21308
DNA (1371bp) protein (457aa)
L-sorbosone dehydrogenase (EC:1.1.1.-) rbh
sorbosone dehydrogenase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E512B6 rbh
L-sorbosone dehydrogenase {ECO:0000313|EMBL:ETC88110.1}; TaxID=863365 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas hortorum pv. carotae str. M081.;"
SCNpilot_cont_1000_bf_scaffold_225_17
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21438..23594
DNA (2157bp) protein (719aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000380FA37 rbh
Iron transporter {ECO:0000313|EMBL:EIL89120.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
TonB-dependent outer membrane receptor; K02014 iron complex outermembrane recepter protein rbh
SCNpilot_cont_1000_bf_scaffold_225_18
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23926..24315)
DNA (390bp) protein (130aa)
TraR/DksA family transcriptional regulator n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDI6_9GAMM
DnaK suppressor protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_1000_bf_scaffold_225_19
unknown

Not on your lists

24490..25596
DNA (1107bp) protein (369aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_225_20
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25593..26831
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4Z3_9GAMM rbh
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_1000_bf_scaffold_225_21
unknown

Not on your lists

27225..27920
DNA (696bp) protein (232aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_225_22

Not on your lists

27913..33633
DNA (5721bp) protein (1907aa)
Uncharacterized protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T1AHJ2_9ZZZZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EQD56652.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
SCNpilot_cont_1000_bf_scaffold_225_23
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33909..34754)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VUJ8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL90889.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_225_24
unknown

Not on your lists

comp(34823..35797)
DNA (975bp) protein (325aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_225_25
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(35839..37074)
DNA (1236bp) protein (412aa)
Major facilitator superfamily (MFS) transporter n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVU0_KORVE rbh
major facilitator transporter rbh
Major facilitator superfamily (MFS) transporter {ECO:0000313|EMBL:ABF39010.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
SCNpilot_cont_1000_bf_scaffold_225_26
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(37125..38174)
DNA (1050bp) protein (350aa)
glutamine-fructose-6-phosphate transaminase (isomerizing); K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] rbh
Glutamine-fructose-6-phosphate transaminase (Isomerizing) {ECO:0000313|EMBL:ABF39009.1}; EC=2.6.1.16 {ECO:0000313|EMBL:ABF39009.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
Glutamine-fructose-6-phosphate transaminase (Isomerizing) n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVU1_KORVE rbh
SCNpilot_cont_1000_bf_scaffold_225_27
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(38171..39136)
DNA (966bp) protein (322aa)
glucokinase; K00845 glucokinase [EC:2.7.1.2] rbh
Glucokinase {ECO:0000313|EMBL:ABF39008.1}; EC=2.7.1.2 {ECO:0000313|EMBL:ABF39008.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
Glucokinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVU2_KORVE rbh
SCNpilot_cont_1000_bf_scaffold_225_28
RBG_13_Chloroflexi_50_21_curated, Chloroflexi, Bacteria

Not on your lists

comp(39124..41313)
DNA (2190bp) protein (730aa)
Uncharacterized protein n=1 Tax=Treponema maltophilum ATCC 51939 RepID=S3KIR2_TREMA rbh
beta-galactosidase trimerisation domain-containing protein
Tax=RBG_13_Chloroflexi_50_21_curated
SCNpilot_cont_1000_bf_scaffold_225_29
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41717..44740
DNA (3024bp) protein (1008aa)
TonB-dependent receptor n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VWS9_9GAMM rbh
TonB-dependent receptor {ECO:0000313|EMBL:EIL91670.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
TonB-dependent receptor
SCNpilot_cont_1000_bf_scaffold_225_30
Granulicella mallensis, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(44913..45674)
DNA (762bp) protein (254aa)
Transcriptional regulator, GntR family with UTRA sensor domain n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NSZ6_GRAMM
transcriptional regulator, GntR family with UTRA sensor domain; K03710 GntR family transcriptional regulator
Transcriptional regulator, GntR family with UTRA sensor domain {ECO:0000313|EMBL:AEU36339.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;"
Displaying items 1-30 of 375 in total

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