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SCNpilot_cont_1000_bf_scaffold_1199

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_1199_1
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40..1149)
DNA (1110bp) protein (370aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034A791E rbh
Porin {ECO:0000313|EMBL:KJV35784.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
phosphate-selective porin O and P; K07221 phosphate-selective porin OprO and OprP
SCNpilot_cont_1000_bf_scaffold_1199_2
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1269..2387)
DNA (1119bp) protein (373aa)
Sulfate/thiosulfate import ATP-binding protein CysA {ECO:0000256|HAMAP-Rule:MF_01701}; EC=3.6.3.25 {ECO:0000256|HAMAP-Rule:MF_01701};; Sulfate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01701}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
cysA; sulfate transport ATP-binding protein; K02045 sulfate transport system ATP-binding protein [EC:3.6.3.25]
ABC transporter n=1 Tax=Dyella japonica RepID=UPI0002E47D40 rbh
SCNpilot_cont_1000_bf_scaffold_1199_3
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2395..3255)
DNA (861bp) protein (287aa)
sulfate/thiosulfate transporter permease subunit n=1 Tax=Dyella japonica RepID=UPI000311E8FF rbh
Sulfate ABC transporter permease {ECO:0000313|EMBL:AHX13722.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
cysW; thiosulfate transporter; ABC superfamily, membrane component; K02047 sulfate transport system permease protein
SCNpilot_cont_1000_bf_scaffold_1199_4
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3252..4076)
DNA (825bp) protein (275aa)
sulfate/thiosulfate transporter subunit n=1 Tax=Dyella japonica RepID=UPI0002DE5642 rbh
Sulfate transporter {ECO:0000313|EMBL:AHX13723.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
cysT; sulfate transport system permease CysT; K02046 sulfate transport system permease protein
SCNpilot_cont_1000_bf_scaffold_1199_5
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4079..5080)
DNA (1002bp) protein (334aa)
ABC transporter permease n=1 Tax=Dyella japonica RepID=UPI00030321FB rbh
ABC transporter permease {ECO:0000313|EMBL:KJV32569.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
sulfate ABC transporter substrate-binding protein rbh
SCNpilot_cont_1000_bf_scaffold_1199_6
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5199..6596)
DNA (1398bp) protein (466aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002D98445 rbh
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:AHX13725.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_1199_7
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6676..7266)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000366F066
Cysteine dioxygenase type I
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_1000_bf_scaffold_1199_8
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7603..9639)
DNA (2037bp) protein (679aa)
endothelin-converting enzyme (EC:3.4.24.71) rbh
Endothelin-converting enzyme n=1 Tax=Rhodanobacter denitrificans RepID=M4NC46_9GAMM rbh
Peptidase {ECO:0000313|EMBL:AHX12355.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
SCNpilot_cont_1000_bf_scaffold_1199_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9747..10358
DNA (612bp) protein (204aa)
Putative acyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NKC9_9GAMM
putative acyltransferase
Putative acyltransferase {ECO:0000313|EMBL:AGG88236.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_1000_bf_scaffold_1199_10
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10355..10681
DNA (327bp) protein (109aa)
Ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WKX9_9GAMM
Ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase {ECO:0000313|EMBL:EIM00121.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase
SCNpilot_cont_1000_bf_scaffold_1199_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10738..11532)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WNU0_9GAMM rbh
outer membrane protein V rbh
Outer membrane protein V {ECO:0000313|EMBL:AGG88239.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_1000_bf_scaffold_1199_12
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11702..12400
DNA (699bp) protein (233aa)
2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphatephosphatase related protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VID6_9GAMM rbh
2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphatephosphatase related protein {ECO:0000313|EMBL:EIL86977.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
haloacid dehalogenase superfamily protein, phosphoserine phosphatase/2,3-diketo-5-methylthio-1-phosphopentane phosphatase rbh
SCNpilot_cont_1000_bf_scaffold_1199_13
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12460..13023
DNA (564bp) protein (188aa)
Class III aminotransferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VID7_9GAMM
Class III aminotransferase {ECO:0000313|EMBL:EIL86978.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
4-aminobutyrate aminotransferase family protein
SCNpilot_cont_1000_bf_scaffold_1199_14
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13023..13685
DNA (663bp) protein (221aa)
Class III aminotransferase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5H5_9GAMM
Class III aminotransferase {ECO:0000313|EMBL:EIL94716.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
4-aminobutyrate aminotransferase family protein
SCNpilot_cont_1000_bf_scaffold_1199_15
unknown

Not on your lists

comp(13890..14381)
DNA (492bp) protein (164aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_1199_16
unknown

Not on your lists

14772..14999
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_1199_17
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14894..16126)
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WR41_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIM01933.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
3-oxoacyl-(acyl-carrier-protein) synthase rbh
SCNpilot_cont_1000_bf_scaffold_1199_18
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16126..16455)
DNA (330bp) protein (110aa)
Acyl carrier protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WCA1_9GAMM
Acyl carrier protein {ECO:0000313|EMBL:EIL97092.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
acyl carrier protein
SCNpilot_cont_1000_bf_scaffold_1199_19
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16494..17564
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WNU7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIM01935.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_1199_20
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17724..18605
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WCA3_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL97094.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Arginase family rbh
SCNpilot_cont_1000_bf_scaffold_1199_21
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18633..20273)
DNA (1641bp) protein (547aa)
Glycosyl transferase family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WR32_9GAMM rbh
Glycosyl transferase family protein {ECO:0000313|EMBL:EIM01924.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase rbh
SCNpilot_cont_1000_bf_scaffold_1199_22
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20385..21590)
DNA (1206bp) protein (402aa)
Putative nucleotide sugar transaminase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WR33_9GAMM rbh
Putative nucleotide sugar transaminase {ECO:0000313|EMBL:EIM01925.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative PLP-dependent enzyme possibly involved in cell wall biogenesis rbh
SCNpilot_cont_1000_bf_scaffold_1199_23
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21607..22020)
DNA (414bp) protein (138aa)
Putative transmembrane protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WR34_9GAMM
Putative transmembrane protein {ECO:0000313|EMBL:EIM01926.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
cation/cationic drug transporter
SCNpilot_cont_1000_bf_scaffold_1199_24
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22017..22394)
DNA (378bp) protein (126aa)
EamA-like transporter family n=1 Tax=Rhodanobacter denitrificans RepID=I4WL07_9GAMM
EamA-like transporter family
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_1000_bf_scaffold_1199_25
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22396..23241)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WAR5_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL96556.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
esterase/lipase rbh
Displaying 25 items

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