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SCNpilot_cont_1000_bf_scaffold_175

Search features with annotation key words

Displaying items 1-30 of 182 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_175_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..266
DNA (264bp) protein (88aa)
PhoH family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WB26_9GAMM
PhoH family protein
PhoH family protein {ECO:0000313|EMBL:EIL96667.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_cont_1000_bf_scaffold_175_2
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

345..1130
DNA (786bp) protein (262aa)
Bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase {ECO:0000313|EMBL:EIL87133.1}; EC=2.7.4.7 {ECO:0000313|EMBL:EIL87133.1};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
phosphomethylpyrimidine kinase; K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
Bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VIU2_9GAMM rbh
SCNpilot_cont_1000_bf_scaffold_175_3
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1208..2146
DNA (939bp) protein (313aa)
aspartyl beta-hydroxylase n=1 Tax=Dyella japonica RepID=UPI00037EC6FB rbh
Aspartyl beta-hydroxylase {ECO:0000313|EMBL:AHX12606.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
aspartyl/asparaginyl beta-hydroxylase-like dioxygenase rbh
SCNpilot_cont_1000_bf_scaffold_175_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2206..3132
DNA (927bp) protein (309aa)
FecI-like sigma-24 factor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W432_9GAMM rbh
FecI-like sigma-24 factor {ECO:0000313|EMBL:EIL94223.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
RNA polymerase sigma factor, sigma-70 family
SCNpilot_cont_1000_bf_scaffold_175_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3177..3638
DNA (462bp) protein (154aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
Alkylhydroperoxidase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W433_9GAMM
alkylhydroperoxidase AhpD family core domain protein
SCNpilot_cont_1000_bf_scaffold_175_6
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3805..4449
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Oceanicaulis alexandrii RepID=UPI0003B7122F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM39917.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
SCNpilot_cont_1000_bf_scaffold_175_7
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4467..5855
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4WES2_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL97963.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein rbh
SCNpilot_cont_1000_bf_scaffold_175_8
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5821..7011)
DNA (1191bp) protein (397aa)
AraC family transcriptional regulator n=1 Tax=Rhodanobacter sp. 115 RepID=I4WES3_9GAMM rbh
AraC family transcriptional regulator {ECO:0000313|EMBL:EIL97964.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
AraC family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_175_9
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7091..8104)
DNA (1014bp) protein (338aa)
Isocitrate dehydrogenase {ECO:0000313|EMBL:EIL97965.1}; EC=1.1.1.41 {ECO:0000313|EMBL:EIL97965.1};; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Isocitrate dehydrogenase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WES4_9GAMM rbh
isocitrate/isopropylmalate dehydrogenase rbh
SCNpilot_cont_1000_bf_scaffold_175_10
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8498..8896)
DNA (399bp) protein (133aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
alkylhydroperoxidase n=1 Tax=Dyella ginsengisoli RepID=UPI00034BED1D
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_175_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8893..9156)
DNA (264bp) protein (88aa)
Glutaredoxin n=1 Tax=Rhodanobacter denitrificans RepID=I4WYB8_9GAMM
Glutaredoxin, GrxC family
Glutaredoxin, GrxC family {ECO:0000313|EMBL:AGG89690.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_1000_bf_scaffold_175_12
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9277..10962
DNA (1686bp) protein (562aa)
Putative beta-barrel assembly-enhancing protease {ECO:0000256|HAMAP-Rule:MF_00997}; EC=3.4.-.- {ECO:0000256|HAMAP-Rule:MF_00997};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Putative Zn-dependent protease n=1 Tax=Rhodanobacter denitrificans RepID=I4WYB7_9GAMM rbh
putative Zn-dependent protease rbh
SCNpilot_cont_1000_bf_scaffold_175_13
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11174..11863
DNA (690bp) protein (230aa)
Phosphate regulon transcriptional regulatory protein PhoB n=1 Tax=Rhodanobacter denitrificans RepID=I4WYB6_9GAMM rbh
Transcriptional regulator PhoB {ECO:0000313|EMBL:AHX12599.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
phosphate regulon transcriptional regulatory protein PhoB rbh
SCNpilot_cont_1000_bf_scaffold_175_14
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11898..13211
DNA (1314bp) protein (438aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Phosphate regulon sensor kinase PhoR n=1 Tax=Rhodanobacter denitrificans RepID=I4WYB5_9GAMM rbh
phosphate regulon sensor kinase PhoR rbh
SCNpilot_cont_1000_bf_scaffold_175_15
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13248..15368
DNA (2121bp) protein (707aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Polyphosphate kinase n=1 Tax=Rhodanobacter denitrificans RepID=M4NFP8_9GAMM rbh
polyphosphate kinase 1 rbh
SCNpilot_cont_1000_bf_scaffold_175_16
unknown

Not on your lists

15699..16040
DNA (342bp) protein (114aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_175_17
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16113..17774
DNA (1662bp) protein (554aa)
Exopolyphosphatase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAC1_9GAMM
Exopolyphosphatase {ECO:0000313|EMBL:EIL96412.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
exopolyphosphatase
SCNpilot_cont_1000_bf_scaffold_175_18
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17867..18571
DNA (705bp) protein (235aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Rhodanobacter denitrificans RepID=I4WYB2_9GAMM rbh
peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family rbh
Peptidyl-prolyl cis-trans isomerase (Rotamase)-cyclophilin family {ECO:0000313|EMBL:AGG89696.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_1000_bf_scaffold_175_19
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18571..19308
DNA (738bp) protein (246aa)
UDP-2,3-diacylglucosamine hydrolase {ECO:0000256|HAMAP-Rule:MF_00575, ECO:0000256|SAAS:SAAS00063966}; EC=3.6.1.54 {ECO:0000256|HAMAP-Rule:MF_00575, ECO:0000256|SAAS:SAAS00063978};; UDP-2,3-diacylglucosamine diphosphatase {ECO:0000256|HAMAP-Rule:MF_00575}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
UDP-2,3-diacylglucosamine hydrolase (EC:3.6.1.-)
UDP-2,3-diacylglucosamine hydrolase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WRK4_9GAMM rbh
SCNpilot_cont_1000_bf_scaffold_175_20
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19309..19926)
DNA (618bp) protein (206aa)
Putative Fa2h protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W761_9GAMM
Putative Fa2h protein {ECO:0000313|EMBL:EIL95302.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
sterol desaturase
SCNpilot_cont_1000_bf_scaffold_175_21
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20129..21016)
DNA (888bp) protein (296aa)
Putative acyltransferase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WUZ3_9GAMM rbh
Putative acyltransferase {ECO:0000313|EMBL:EIM03285.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
1-acyl-sn-glycerol-3-phosphate acyltransferase
SCNpilot_cont_1000_bf_scaffold_175_22
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21097..22341)
DNA (1245bp) protein (415aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
cysteine desulfurase-like protein, SufS subfamily (EC:2.8.1.7)
cysteine desulfurase n=1 Tax=Dyella ginsengisoli RepID=UPI000345C0F1
SCNpilot_cont_1000_bf_scaffold_175_23
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22469..22909)
DNA (441bp) protein (147aa)
FeS assembly protein SufD n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJG6_9GAMM
FeS assembly protein SufD {ECO:0000313|EMBL:EIL87357.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Iron-regulated ABC transporter permease protein SufD
SCNpilot_cont_1000_bf_scaffold_175_24
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22852..23589)
DNA (738bp) protein (246aa)
FeS assembly protein SufD n=1 Tax=Rhodanobacter denitrificans RepID=I4WNT2_9GAMM
Iron-regulated ABC transporter permease protein SufD
Fe-S cluster assembly protein SufD {ECO:0000313|EMBL:AHX12352.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
SCNpilot_cont_1000_bf_scaffold_175_25
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23586..24353)
DNA (768bp) protein (256aa)
FeS assembly ATPase SufC n=1 Tax=Rhodanobacter sp. 115 RepID=I4WG95_9GAMM rbh
FeS assembly ATPase SufC {ECO:0000313|EMBL:EIL98486.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
FeS assembly ATPase SufC; K09013 Fe-S cluster assembly ATP-binding protein rbh
SCNpilot_cont_1000_bf_scaffold_175_26
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24517..25989)
DNA (1473bp) protein (491aa)
Cysteine desulfurase activator complex subunit SufB n=1 Tax=Rhodanobacter sp. 115 RepID=I4WG96_9GAMM rbh
Cysteine desulfurase activator complex subunit SufB {ECO:0000313|EMBL:EIL98487.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Iron-regulated ABC transporter membrane component SufB rbh
SCNpilot_cont_1000_bf_scaffold_175_27
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25986..26459)
DNA (474bp) protein (158aa)
FeS assembly SUF system regulator, gammaproteobacterial n=1 Tax=Rhodanobacter sp. 115 RepID=I4WG97_9GAMM
FeS assembly SUF system regulator, gammaproteobacterial {ECO:0000313|EMBL:EIL98488.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
transcriptional regulator, BadM/Rrf2 family
SCNpilot_cont_1000_bf_scaffold_175_28
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26693..27031
DNA (339bp) protein (113aa)
Nitrogen regulatory protein PII n=1 Tax=Rhodanobacter sp. 115 RepID=I4WG98_9GAMM
Nitrogen regulatory protein PII {ECO:0000313|EMBL:EIL98489.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
nitrogen regulatory protein PII; K04752 nitrogen regulatory protein P-II 2
SCNpilot_cont_1000_bf_scaffold_175_29
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27021..28397
DNA (1377bp) protein (459aa)
ammonium transporter n=1 Tax=Dyella ginsengisoli RepID=UPI000346D7A7 rbh
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
ammonium transporter; K03320 ammonium transporter, Amt family rbh
SCNpilot_cont_1000_bf_scaffold_175_30
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28455..29468
DNA (1014bp) protein (338aa)
Aminoglycoside phosphotransferase n=1 Tax=Rhodanobacter denitrificans RepID=I4WNS8_9GAMM rbh
aminoglycoside phosphotransferase rbh
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:AGG88227.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying items 1-30 of 182 in total

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