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SCNpilot_cont_1000_bf_scaffold_5055

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_5055_1
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..1114)
DNA (1113bp) protein (371aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
ATP synthase subunit alpha n=1 Tax=Rhodanobacter sp. 115 RepID=I4VIF8_9GAMM
proton translocating ATP synthase, F1 alpha subunit
SCNpilot_cont_1000_bf_scaffold_5055_2
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1324..1857)
DNA (534bp) protein (178aa)
F0F1 ATP synthase subunit delta n=1 Tax=Dyella japonica RepID=UPI0003028536
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
ATP synthase F1 subcomplex delta subunit
SCNpilot_cont_1000_bf_scaffold_5055_3
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1861..2331)
DNA (471bp) protein (157aa)
ATP synthase subunit b n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLS6_9GAMM
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
ATP synthase, F0 subunit b
SCNpilot_cont_1000_bf_scaffold_5055_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2428..2706)
DNA (279bp) protein (93aa)
F0F1 ATP synthase subunit C n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFN0_9GAMM
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242778}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
ATP synthase F0 subcomplex C subunit
SCNpilot_cont_1000_bf_scaffold_5055_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2770..3411)
DNA (642bp) protein (214aa)
ATP synthase subunit a n=1 Tax=Rhodanobacter denitrificans RepID=I4WMX9_9GAMM rbh
F0F1-type ATP synthase, alpha subunit rbh
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_1000_bf_scaffold_5055_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3415..3780)
DNA (366bp) protein (122aa)
ATP synthase I chain n=1 Tax=Rhodanobacter denitrificans RepID=M4NIR4_9GAMM
ATP synthase I chain
ATP synthase I chain {ECO:0000313|EMBL:AGG90840.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_1000_bf_scaffold_5055_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4041..4427)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFM7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98268.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Phasin protein
SCNpilot_cont_1000_bf_scaffold_5055_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4581..4943)
DNA (363bp) protein (121aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase {ECO:0000256|PIRNR:PIRNR006113}; EC=4.-.-.- {ECO:0000256|PIRNR:PIRNR006113};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
6-carboxy-5,6,7,8-tetrahydropterin synthase n=1 Tax=Rhodanobacter denitrificans RepID=I4WMY2_9GAMM
queuosine biosynthesis protein QueD
SCNpilot_cont_1000_bf_scaffold_5055_9
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5277..6353
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VPR1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89202.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
SCNpilot_cont_1000_bf_scaffold_5055_10
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6377..6565
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=Herbaspirillum seropedicae RepID=UPI0003643748
DNA mismatch repair protein MutL {ECO:0000313|EMBL:EZP37635.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_5055_11

Not on your lists

6534..6992
DNA (459bp) protein (153aa)
Uncharacterized protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T1A612_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD52397.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
SEC-C motif family protein
Displaying 11 items

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