ggKbase home page

SCNpilot_cont_1000_bf_scaffold_1344

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_1344_1
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..1125
DNA (1125bp) protein (375aa)
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:CDK01896.1}; EC=3.6.4.12 {ECO:0000313|EMBL:CDK01896.1};; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
recQ; superfamily II DNA helicase; K03654 ATP-dependent DNA helicase RecQ [EC:3.6.4.12]
ATP-dependent DNA helicase RecQ n=1 Tax=Microbacterium sp. B19 RepID=UPI00034DA655
SCNpilot_cont_1000_bf_scaffold_1344_2
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1234..2907
DNA (1674bp) protein (558aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
fhs; formate-tetrahydrofolate ligase Fhs (EC:6.3.4.3); K01938 formate--tetrahydrofolate ligase [EC:6.3.4.3] rbh
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000362A1ED rbh
SCNpilot_cont_1000_bf_scaffold_1344_3
Mesorhizobium sp. UASWS1009, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2990..3472
DNA (483bp) protein (161aa)
gpoA; glutathione peroxidase; K00432 glutathione peroxidase [EC:1.11.1.9] id=7721147 bin=CNBR_ACT species=Leifsonia xyli genus=Leifsonia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=1566387 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. UASWS1009.;"
glutathione peroxidase
SCNpilot_cont_1000_bf_scaffold_1344_4
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3474..4289)
DNA (816bp) protein (272aa)
glycoside hydrolase n=1 Tax=Agromyces subbeticus RepID=UPI0003B4837C
Uncharacterized protein {ECO:0000313|EMBL:KGM02239.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
O-Glycosyl hydrolase
SCNpilot_cont_1000_bf_scaffold_1344_5
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4537..6678
DNA (2142bp) protein (714aa)
acyl-CoA dehydrogenase; K00232 acyl-CoA oxidase [EC:1.3.3.6] rbh
acyl-CoA dehydrogenase n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003769940 rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KHK97182.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
SCNpilot_cont_1000_bf_scaffold_1344_6
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6729..7310
DNA (582bp) protein (194aa)
3-methyladenine DNA glycosylase {ECO:0000313|EMBL:KHK97184.1}; EC=3.2.2.20 {ECO:0000313|EMBL:KHK97184.1};; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
tag; 3-methyladenine DNA glycosylase; K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003194F1D rbh
SCNpilot_cont_1000_bf_scaffold_1344_7
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7471..11877
DNA (4407bp) protein (1469aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037F6C7D rbh
Fibronectin type III domain protein {ECO:0000313|EMBL:KJL26686.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
fibronectin type III domain-containing protein rbh
SCNpilot_cont_1000_bf_scaffold_1344_8
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

11841..13379
DNA (1539bp) protein (513aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00035F12AB
Fibronectin type III domain-containing protein
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_cont_1000_bf_scaffold_1344_9
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13426..14400
DNA (975bp) protein (325aa)
ATPase; K03924 MoxR-like ATPase [EC:3.6.3.-] rbh
ATPase AAA n=1 Tax=Microbacterium sp. 292MF RepID=UPI000377BBCC rbh
ATPase family associated with various cellular activities (AAA) {ECO:0000313|EMBL:KJL19345.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
SCNpilot_cont_1000_bf_scaffold_1344_10
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

14400..15656
DNA (1257bp) protein (419aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002DBF697 rbh
hypothetical protein rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
SCNpilot_cont_1000_bf_scaffold_1344_11
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15653..16063
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E800D4
Transglutaminase-like superfamily protein {ECO:0000313|EMBL:KJQ53300.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
protease, transglutaminase-like protein
Displaying 11 items

View Taxonomy