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SCNpilot_cont_1000_bf_scaffold_1334_8

Organism: SCNPILOT_CONT_300_BF_Microbacterium_70_39_partial

partial RP 40 / 55 BSCG 40 / 51 MC: 1 ASCG 10 / 38
Location: comp(5140..5838)

Top 3 Functional Annotations

Value Algorithm Source
Esterase containing a GAF sensor domain id=7720682 bin=CNBR_ACT species=Clavibacter michiganensis genus=Clavibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 31.1
  • Coverage: 219.0
  • Bit_score: 108
  • Evalue 1.30e-20
Putative diguanylate cyclase (GGDEF domain) with GAF sensor domain {ECO:0000313|EMBL:EAR24115.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.8
  • Coverage: 201.0
  • Bit_score: 104
  • Evalue 1.60e-19
esterase containing a GAF sensor domain similarity KEGG
DB: KEGG
  • Identity: 33.3
  • Coverage: 222.0
  • Bit_score: 102
  • Evalue 1.70e-19

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Taxonomy

marine actinobacterium PHSC20C1 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 699
ATGGATCGCTATACGCGCCTCCTGGCGTCGTCGCACGTCCTGCTGAGGCCGGTGTTCCGAGCCTGGTTCCGCGCGCGGACGAAAGGCCTGCAGACGTGGTGCTACCCGCACGGGGAGTCGGTGGTGGGCGTCCCCGGTCCCGAGCCCGCCCGGATCCTCCTCCTCGGCGACGGGCCCGCGGCGGGATACGGCGTGCTCACGCAGCAGCTGGGAGTCGCCGGTCACCTGGCCCGCCACCTCGCCGAGAGCATGGCGCGCGGTGTCGTTGTGACCGTCGAGGCGTGGCCGGCCGCGTCGGCCGAGTCCACGCTCGAACGCCTCCCCCACATCGATCTCGATGGCTACGACGGCATCGTCGTCATGCTCGCCACGTCCGACGCGCTCCGCCTGACGTCACGACGCTCCTGGTCTCGCAGCATGGCCGGCCTGCTTCGCACTCTGCCCGGCTCGGACACCCGCGCGGTGTTCGTCACTACCACCGCCAGTGTGCGCCTGGCCCGGACCCTCCCACCGTTCGCACGCCGCGTCGCCGGACGTCACGCGCAGGTGCTGGACGCGGAGACCCGGCGGATCTGCGCCGAGACGACCACGACGCTCATCCCTCTGGACGCCGTCAACGAACTGAGTCAGCGCACCTATGCGACGTGGGGTCGCCGGATCGCGGCGGTCGTCGTCGCCGATCTGCACCCGAACGGGTGA
PROTEIN sequence
Length: 233
MDRYTRLLASSHVLLRPVFRAWFRARTKGLQTWCYPHGESVVGVPGPEPARILLLGDGPAAGYGVLTQQLGVAGHLARHLAESMARGVVVTVEAWPAASAESTLERLPHIDLDGYDGIVVMLATSDALRLTSRRSWSRSMAGLLRTLPGSDTRAVFVTTTASVRLARTLPPFARRVAGRHAQVLDAETRRICAETTTTLIPLDAVNELSQRTYATWGRRIAAVVVADLHPNG*