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SCNpilot_cont_1000_bf_scaffold_1334

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_1334_1
Rhodococcus sp. PML026, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23..697)
DNA (675bp) protein (225aa)
Putative hydrolase n=1 Tax=Rhodococcus opacus (strain B4) RepID=C1ASN2_RHOOB
Putative hydrolase {ECO:0000313|EMBL:KJV02323.1}; TaxID=1356405 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. PML026.;"
hydrolase
SCNpilot_cont_1000_bf_scaffold_1334_2
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

760..1725
DNA (966bp) protein (322aa)
Putative oxidoreductase YghA {ECO:0000313|EMBL:KJQ54202.1}; EC=1.-.-.- {ECO:0000313|EMBL:KJQ54202.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
dehydrogenase with different specificities; K00540 [EC:1.-.-.-] rbh
dehydrogenase n=1 Tax=Microbacterium yannicii RepID=UPI0002D5CD9A rbh
SCNpilot_cont_1000_bf_scaffold_1334_3
Bacillus sp. EGD-AK10, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1767..2177
DNA (411bp) protein (137aa)
Ribosomal subunit interface protein n=1 Tax=Bacillus sp. EGD-AK10 RepID=U1Z6L9_9BACI
hypothetical protein
Ribosomal subunit interface protein {ECO:0000313|EMBL:ERI42938.1}; TaxID=1386080 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. EGD-AK10.;"
SCNpilot_cont_1000_bf_scaffold_1334_4
Streptomyces griseoaurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2239..3054
DNA (816bp) protein (272aa)
Hydrolase n=1 Tax=Streptomyces griseoaurantiacus M045 RepID=F3NTX6_9ACTO
Hydrolase {ECO:0000313|EMBL:EGG43286.1}; TaxID=996637 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseoaurantiacus M045.;"
alpha/beta hydrolase fold protein
SCNpilot_cont_1000_bf_scaffold_1334_5
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3195..3722
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A6P0_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ51650.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_1334_6
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3734..4237
DNA (504bp) protein (168aa)
FMN reductase (NADPH) {ECO:0000313|EMBL:KJL19874.1}; EC=1.5.1.38 {ECO:0000313|EMBL:KJL19874.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
NADPH-dependent FMN reductase; K00299 FMN reductase [EC:1.5.1.38]
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036CB7F2
SCNpilot_cont_1000_bf_scaffold_1334_7
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4227..4961)
DNA (735bp) protein (245aa)
Mycothiol acetyltransferase {ECO:0000313|EMBL:KJL29826.1}; EC=2.3.1.189 {ECO:0000313|EMBL:KJL29826.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B6E9D2 rbh
acetyltransferase
SCNpilot_cont_1000_bf_scaffold_1334_8
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5140..5838)
DNA (699bp) protein (233aa)
Esterase containing a GAF sensor domain id=7720682 bin=CNBR_ACT species=Clavibacter michiganensis genus=Clavibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
Putative diguanylate cyclase (GGDEF domain) with GAF sensor domain {ECO:0000313|EMBL:EAR24115.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
esterase containing a GAF sensor domain
SCNpilot_cont_1000_bf_scaffold_1334_9
Leifsonia aquatica, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6001..6975
DNA (975bp) protein (325aa)
Transcriptional regulator, AraC family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T3R8_LEIAQ rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ERK72133.1}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;"
RhaSlike HTH-type transcriptional activator
SCNpilot_cont_1000_bf_scaffold_1334_10
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7033..7719
DNA (687bp) protein (229aa)
Peptidase S51 dipeptidase E n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0L7J8_9ACTO rbh
Peptidase S51 {ECO:0000313|EMBL:KKB12755.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
peptidase S51 dipeptidase E
SCNpilot_cont_1000_bf_scaffold_1334_11
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7747..7974)
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003480B41
Ribosome-associated protein {ECO:0000313|EMBL:KJL25720.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein; K14761 ribosome-associated protein
SCNpilot_cont_1000_bf_scaffold_1334_12
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8052..8663
DNA (612bp) protein (204aa)
SNARE associated Golgi protein-like protein n=1 Tax=Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM 6432 / NBRC 12425 / NCIMB 8070) RepID=K7S858_PROA4
Uncharacterized protein {ECO:0000313|EMBL:KHK99548.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
SNARE associated Golgi protein-like protein
SCNpilot_cont_1000_bf_scaffold_1334_13
Leucobacter komagatae, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8851..9240
DNA (390bp) protein (130aa)
membrane protein n=1 Tax=Leucobacter salsicius RepID=UPI000347484E
Leucobacter komagatae strain VKM ST2845 L_komagatae_46, whole genome shotgun sequence {ECO:0000313|EMBL:KIP51314.1}; TaxID=55969 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter komagatae.;"
SCNpilot_cont_1000_bf_scaffold_1334_14
Propionibacterium freudenreichii, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9338..10294)
DNA (957bp) protein (319aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=66712 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium freudenreichii subsp. freudenreichii.;"
diacylglyceryl transferase n=1 Tax=Humibacter albus RepID=UPI0003B609B5
prolipoprotein diacylglyceryl transferase rbh
SCNpilot_cont_1000_bf_scaffold_1334_15
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10409..10792
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3BBC2_9MICO
HTH-type transcriptional regulator KmtR {ECO:0000313|EMBL:KJL32296.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
Cgl2782; transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_1334_16
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10789..11598
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037989A4
Putative cation efflux system protein {ECO:0000313|EMBL:KJL32295.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
Co/Zn/Cd cation transporter
SCNpilot_cont_1000_bf_scaffold_1334_17
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11953..12084
DNA (132bp) protein (44aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E7G5_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC07156.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_1334_18
Gordonia rhizosphera, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12151..12540
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Leucobacter salsicius RepID=UPI000344D895
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1108045 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia rhizosphera NBRC 16068.;"
thioredoxin
SCNpilot_cont_1000_bf_scaffold_1334_19
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12537..14228
DNA (1692bp) protein (564aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E7G4_9MICO rbh
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EIC07155.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase rbh
SCNpilot_cont_1000_bf_scaffold_1334_20
unknown

Not on your lists

14266..14505
DNA (240bp) protein (80aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_1334_21
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14502..14780
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Micrococcus luteus RepID=UPI0003021B94
Transcriptional repressor FrmR {ECO:0000313|EMBL:KJL39562.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_1334_22
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15127..16551)
DNA (1425bp) protein (475aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LWC1_ACIC1
MFS transporter {ECO:0000313|EMBL:EWT05725.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
EmrB/QacA family drug resistance transporter
SCNpilot_cont_1000_bf_scaffold_1334_23
Sinomonas sp. MUSC 117, Sinomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16647..17153
DNA (507bp) protein (169aa)
MarR family transcriptional regulator n=1 Tax=Gordonia neofelifaecis NRRL B-59395 RepID=F1YI53_9ACTO
MarR family transcriptional regulator {ECO:0000313|EMBL:KHL04320.1}; TaxID=1338436 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Sinomonas.;" source="Sinomonas sp. MUSC 117.;"
putative MarR family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_1334_24
BJP_08E140C01_Actinomycetales_70_11, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(17342..17821)
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037ED132
hypothetical protein
Tax=BJP_08E140C01_Actinomycetales_70_11
SCNpilot_cont_1000_bf_scaffold_1334_25
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17919..20912
DNA (2994bp) protein (998aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036A025B rbh
Uncharacterized protein {ECO:0000313|EMBL:KHK99591.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
thioredoxin reductase rbh
SCNpilot_cont_1000_bf_scaffold_1334_26
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20969..22582
DNA (1614bp) protein (538aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
uvrD; superfamily I DNA and RNA helicase; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
Superfamily I DNA and RNA helicase n=1 Tax=Microbacterium sp. TS-1 RepID=U2YZ87_9MICO
Displaying 26 items

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