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SCNpilot_cont_1000_bf_scaffold_1242_10

Organism: SCNPILOT_CONT_300_BF_Microbacterium_70_39_partial

partial RP 40 / 55 BSCG 40 / 51 MC: 1 ASCG 10 / 38
Location: comp(8854..10470)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI0002898818 similarity UNIREF
DB: UNIREF100
  • Identity: 49.4
  • Coverage: 538.0
  • Bit_score: 469
  • Evalue 4.00e-129
  • rbh
Putative two-component system response regulator {ECO:0000313|EMBL:EAR26250.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.5
  • Coverage: 538.0
  • Bit_score: 463
  • Evalue 5.20e-127
Regulatory protein, LuxR similarity KEGG
DB: KEGG
  • Identity: 34.6
  • Coverage: 549.0
  • Bit_score: 243
  • Evalue 1.90e-61

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Taxonomy

marine actinobacterium PHSC20C1 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1617
GTGGCCAGTGACACGCTCGGCAGCGCGCAGCGCCTGCTCCGCGCCGGCCGCTGGGCGGAGGCGGAGGCCGCGTTCGAGCGGAGCCTCGCGGGCTCCGGGGATGCCCCGTCCGCGCACGAAGGGCTCGCGCAGGCACGCTGGTGGCTCGACGACGGCGACGGATGCCTCGCGGCGCGCGAGCAGGCGTACCGCGGATACCGCGCCGCCGACGACCCCCTCGGTGCGGCGCGCGCCGCGACCGCCCTCGCGTGGGATGCCGTGCTCTTCGGCCAGGGCGCGGCGATTGCGCGGGGCTGGTTCGCGCGCGCCTCCGGGCTCCTCGAACCGTTCCCGGCCTCGTCGGAGTCGGGCTGGCTGTCGGTGCGCGAGGCGGAGCTCGCCTTCAACATCGACCGCGACGCCGCCCATGCGCTGCGCGCGGCCGAGAGCGCACAGCGACTCGGCGAGTCGATCGCGGACTCCGACCTCGCGTTCGCCGGCGCCGCGTACGCGGGTCTCGCGCTCGTCGCCCTCGGACGGGTCCGCGACGGACTCCATCGGCTCGACGCGGCGGTCGCGGCAGCGACGGCGGGAGATGTCGGCGACCTCATGTGGCTCGGCAAGATCTGCTGCTGGCTGATCGTGGCGTGCCGCGAGACGCACGACATCGAACGCGCCGCGGCCTGGTGCGAGCGGGTCGAGCGGCTCGCGATCGACCTCGGCCTCTCGCCGCTCACCTCGGAATGCCGCATCCAGCACGCCGCGGTGCAGGTGTCGCGCGGAACGTGGGGCGCCGCCGATGAGCAGCTGACCGCGCTGACCGCACGCTTGGCGACCTCCCGCCGGGAGGCCCGCTTCGAGGCACTCGCGGAGCTGGGAGAGCTGCGCCGCCGTCAGGGGCGCACGGCGGAGGCCGCCCGCCTGCTCGACCAGGCCGAGTTCCAGACCACCGCGATCGTCGGGCGCGCGCGGCTGCGGCTCTCCCGCGGCGAGCACGCGTCGGCGTGGTCGCTCGTGGGCGGACTGCTCGACCGCATCCCCGCATCCAACCGGCTGGCCCGTGCCGATGTGCTGCCGACCGCGGTGTCGGCGGCGCTCGCGACCGGACGCACGGACGTGGCGGCCGGGTTCGCCGGGGAGCTCTCGGCGACGGCCGCGATGATCGGCACCCATCCGCTCCTCGCCTTCGCCGCAGCGGCCCGCTCCGAGGTCGGCGGGGACAGTGCCGTCGCGGACGGGCAGGAGGCGGTGCAGCGCTTCAGCGCGGCCGGGCTCCAGTACGAGGCGGCCCAGTCGCGCCTCATCCTCGCCGGGCGTCTGACCGAGGCGGGCGATGCGCTCGGCGCGGAGGAGCAGCTCCGGGCCGCCCGGGACGGCTTCGCACTCCTCGGCGCGGCGGCGGACGCCGAGCGGGTGCGGTCGCGGCTGCGGGACGCGGTCGCTCCGGTCCCGCTCACCGGACGACAACGGGACGTGCTCCGGCTCGTCGCGGCGGGCAGGACGAACGCCGAGATCGCCGCCGAGATGGGCCTCAGCGAGCACACCGTGCACCGCCACATCGCGAACATCCTGGAGCGACTCGGCGTCGGCTCCCGGGCCGGCGCCGTCGCCCGGGCCGCCGCCGAACGCCTGCTCTGA
PROTEIN sequence
Length: 539
VASDTLGSAQRLLRAGRWAEAEAAFERSLAGSGDAPSAHEGLAQARWWLDDGDGCLAAREQAYRGYRAADDPLGAARAATALAWDAVLFGQGAAIARGWFARASGLLEPFPASSESGWLSVREAELAFNIDRDAAHALRAAESAQRLGESIADSDLAFAGAAYAGLALVALGRVRDGLHRLDAAVAAATAGDVGDLMWLGKICCWLIVACRETHDIERAAAWCERVERLAIDLGLSPLTSECRIQHAAVQVSRGTWGAADEQLTALTARLATSRREARFEALAELGELRRRQGRTAEAARLLDQAEFQTTAIVGRARLRLSRGEHASAWSLVGGLLDRIPASNRLARADVLPTAVSAALATGRTDVAAGFAGELSATAAMIGTHPLLAFAAAARSEVGGDSAVADGQEAVQRFSAAGLQYEAAQSRLILAGRLTEAGDALGAEEQLRAARDGFALLGAAADAERVRSRLRDAVAPVPLTGRQRDVLRLVAAGRTNAEIAAEMGLSEHTVHRHIANILERLGVGSRAGAVARAAAERLL*