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SCNpilot_cont_1000_bf_scaffold_1242

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_1242_1
unknown

Not on your lists

2..79
DNA (78bp) protein (26aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_1242_2
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

290..1588
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Streptomyces sp. HGB0020 RepID=S2ZZH7_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KFF98901.1}; TaxID=1930 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabiei.;"
ribose ABC transporter, substrate-binding protein
SCNpilot_cont_1000_bf_scaffold_1242_3
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1683..2612
DNA (930bp) protein (310aa)
gluconolactonase n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036C2E2C rbh
Gluconolactonase {ECO:0000313|EMBL:KJC40443.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
gluconolactonase rbh
SCNpilot_cont_1000_bf_scaffold_1242_4
R_Gammaproteobacteria_56_15, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2609..3052
DNA (444bp) protein (148aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQH2_9SPHN
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_56_15_curated
SCNpilot_cont_1000_bf_scaffold_1242_5
Burkholderia sp. H160, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3094..3543
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. H160 RepID=B5WII4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EEA01847.1}; TaxID=516466 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. H160.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_1242_6
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3574..5280
DNA (1707bp) protein (569aa)
dihydroxyacetone kinase (EC:2.7.1.29); K00863 dihydroxyacetone kinase [EC:2.7.1.29] rbh
Glycerone kinase {ECO:0000313|EMBL:ACQ79803.1}; EC=2.7.1.29 {ECO:0000313|EMBL:ACQ79803.1};; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
Glycerone kinase n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C3A4_BEUC1 rbh
SCNpilot_cont_1000_bf_scaffold_1242_7
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5616..6740
DNA (1125bp) protein (375aa)
Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase {ECO:0000313|EMBL:KJL28947.1}; EC=3.5.1.- {ECO:0000313|EMBL:KJL28947.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037FF8E6
xylanase/chitin deacetylase
SCNpilot_cont_1000_bf_scaffold_1242_8
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6964..8301
DNA (1338bp) protein (446aa)
Putative membrane protein YeiH n=1 Tax=Streptomyces davawensis JCM 4913 RepID=K4QSE3_9ACTO rbh
Putative membrane protein YeiH rbh
Putative membrane protein YeiH {ECO:0000313|EMBL:CCK24501.1}; TaxID=1214101 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces davawensis JCM 4913.;"
SCNpilot_cont_1000_bf_scaffold_1242_9
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8341..8757)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI000344C4B3
Uncharacterized protein {ECO:0000313|EMBL:KIC56795.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
SCNpilot_cont_1000_bf_scaffold_1242_10
marine actinobacterium PHSC20C1, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8854..10470)
DNA (1617bp) protein (539aa)
transcriptional regulator n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI0002898818 rbh
Putative two-component system response regulator {ECO:0000313|EMBL:EAR26250.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;"
Regulatory protein, LuxR
SCNpilot_cont_1000_bf_scaffold_1242_11
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10559..11947
DNA (1389bp) protein (463aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI000375052C rbh
Pyridoxal-dependent decarboxylase {ECO:0000313|EMBL:CDK00518.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
pyridoxal-dependent decarboxylase
SCNpilot_cont_1000_bf_scaffold_1242_12
Gordonia sputi, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12170..12796
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003828197
Putative hydrolase {ECO:0000313|EMBL:GAB39740.1}; TaxID=1089453 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia sputi NBRC 100414.;"
alpha/beta hydrolase fold protein
SCNpilot_cont_1000_bf_scaffold_1242_13
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12840..13241)
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034DDD16
Glucose-6-phosphate dehydrogenase {ECO:0000313|EMBL:KHK97229.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
glucose-6-phosphate 1-dehydrogenase
SCNpilot_cont_1000_bf_scaffold_1242_14
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13299..13898)
DNA (600bp) protein (200aa)
Transcriptional regulator, TetR family n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6W479_KINRD
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABS01618.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
SCNpilot_cont_1000_bf_scaffold_1242_15
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14018..14845
DNA (828bp) protein (276aa)
chloride peroxidase (EC:1.11.1.10) rbh
Chloride peroxidase {ECO:0000313|EMBL:ABS01619.1}; EC=1.11.1.10 {ECO:0000313|EMBL:ABS01619.1};; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
Chloride peroxidase n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6W480_KINRD rbh
SCNpilot_cont_1000_bf_scaffold_1242_16
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14917..15771
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Metascardovia criceti RepID=UPI0003767C27
Uncharacterized protein {ECO:0000313|EMBL:EOS67060.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
aldo/keto reductase family protein
SCNpilot_cont_1000_bf_scaffold_1242_17
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15916..17109)
DNA (1194bp) protein (398aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
DNA-directed DNA polymerase (EC:2.7.7.7); K02346 DNA polymerase IV [EC:2.7.7.7]
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002EBB532 rbh
SCNpilot_cont_1000_bf_scaffold_1242_18
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17168..18304
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003665395 rbh
Uncharacterized protein {ECO:0000313|EMBL:KEP74821.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
hypothetical protein rbh
SCNpilot_cont_1000_bf_scaffold_1242_19
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18532..19743
DNA (1212bp) protein (404aa)
tRNA(Glu)-specific nuclease WapA {ECO:0000313|EMBL:KJL24098.1}; EC=3.1.-.- {ECO:0000313|EMBL:KJL24098.1};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
Secreted protein n=1 Tax=Leifsonia xyli subsp. cynodontis DSM 46306 RepID=U3PC69_LEIXC
secreted protein
SCNpilot_cont_1000_bf_scaffold_1242_20
Mycobacterium abscessus, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20813..21121
DNA (309bp) protein (103aa)
Putative NAD(+)--arginine ADP-ribosyltransferase Mav domain protein n=1 Tax=Mycobacterium abscessus subsp. bolletii 50594 RepID=R4UV28_MYCAB
putative NAD(+)--arginine ADP-ribosyltransferase Mav domain protein
Putative NAD(+)--arginine ADP-ribosyltransferase Mav domain protein {ECO:0000313|EMBL:AGM30000.1}; TaxID=1303024 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium abscessus.;" source="Mycobacterium abscessus subsp. bolletii 50594.;"
SCNpilot_cont_1000_bf_scaffold_1242_21
unknown

Not on your lists

21124..21567
DNA (444bp) protein (148aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_1242_22
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22134..22526
DNA (393bp) protein (131aa)
Putative uncharacterized protein n=1 Tax=Ralstonia solanacearum K60-1 RepID=H5WCJ9_RALSL
Putative uncharacterized protein {ECO:0000313|EMBL:CCF97520.1}; TaxID=1091042 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum K60-1.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_1242_23
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22718..23053)
DNA (336bp) protein (112aa)
Lignostilbene-alpha,beta-dioxygenase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NGS5_MICTS
Uncharacterized protein {ECO:0000313|EMBL:KIC58478.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
lignostilbene-alpha,beta-dioxygenase
SCNpilot_cont_1000_bf_scaffold_1242_24
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23050..23622)
DNA (573bp) protein (191aa)
Aspartate/tyrosine/aromatic aminotransferase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NGS4_MICTS
Uncharacterized protein {ECO:0000313|EMBL:CDJ99687.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
aspartate/tyrosine/aromatic aminotransferase
SCNpilot_cont_1000_bf_scaffold_1242_25
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23628..24170)
DNA (543bp) protein (181aa)
RNA polymerase sigma 70 n=1 Tax=Microbacterium sp. B19 RepID=UPI00034B32B9
RNA polymerase sigma 70 {ECO:0000313|EMBL:KEP74150.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_cont_1000_bf_scaffold_1242_26
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24294..24704
DNA (411bp) protein (137aa)
alkaline-shock protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003483ED8
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:BAJ75073.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_1000_bf_scaffold_1242_27
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24701..24889
DNA (189bp) protein (63aa)
UPI000262A430 related cluster id=7720671 bin=CNBR_ACT species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACT organism_group=Actinobacteria
Uncharacterized protein {ECO:0000313|EMBL:KJL34818.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_1242_28
unknown

Not on your lists

24886..25230
DNA (345bp) protein (115aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_1242_29
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25227..25787
DNA (561bp) protein (187aa)
Putative membrane protein n=1 Tax=Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 RepID=M5B6C6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:CDJ99692.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_1242_30
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25784..26308
DNA (525bp) protein (175aa)
Putative membrane protein {ECO:0000313|EMBL:CDJ99693.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
Putative membrane protein id=7720668 bin=CNBR_ACT species=Clavibacter michiganensis genus=Clavibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
hypothetical protein
Displaying items 1-30 of 36 in total

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