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SCNpilot_cont_1000_bf_scaffold_1242_32

Organism: SCNPILOT_CONT_300_BF_Microbacterium_70_39_partial

partial RP 40 / 55 BSCG 40 / 51 MC: 1 ASCG 10 / 38
Location: comp(27102..27641)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037756E6 similarity UNIREF
DB: UNIREF100
  • Identity: 73.3
  • Coverage: 180.0
  • Bit_score: 251
  • Evalue 7.40e-64
ECF RNA polymerase sigma factor SigG {ECO:0000313|EMBL:KJL21642.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.6
  • Coverage: 179.0
  • Bit_score: 213
  • Evalue 3.10e-52
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 43.5
  • Coverage: 191.0
  • Bit_score: 130
  • Evalue 4.60e-28

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Taxonomy

Microbacterium azadirachtae → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGCTGCAGTCGCTCGCACCCGCGCAGCGCGGAGCGTTCGTGCTGCGCGACATCATCGGGCTCACCGCGGCGGAGACGGCGGCCGTGCTCGGCGTCTCGGTCGCGGCCGCGAACTCGGCGCTGCAGCGCGCCCGTGCCGCTCTCGGCACCCGGACCCGGCGGTCGGCCGCGCTCGCCCCGGAGGCGGTGGAGAAGTACGCCCGTGCGATCGAGCGGGCGGATGTCGCGGCCCTCGCGGCGCTCGTCGCCGACGACGTCGTCTTCGAGATGCCGCCGGTGCCGCACTGGTCGCGGGACCGCGCGACGTACCGCGCGTTCATGGCCGACTTCTTCGCCCGCCGTGGCTCGCGGTGGGCGGCGACCGCCATCTCGGCGAACGGACAGCGTGGCATCCTGCTCCACCGTCTCGGCGACGACGGACCCGAGCCGCACACGCTCCAGCTCTTCGACGGGGACGGCACGACCATCGATCACGTGCTCGTCTATCAGGACCCGCGGCTGTTCGCCCTGTTCGAGACGGGATCCCCCGTCCGGCGATGA
PROTEIN sequence
Length: 180
MLQSLAPAQRGAFVLRDIIGLTAAETAAVLGVSVAAANSALQRARAALGTRTRRSAALAPEAVEKYARAIERADVAALAALVADDVVFEMPPVPHWSRDRATYRAFMADFFARRGSRWAATAISANGQRGILLHRLGDDGPEPHTLQLFDGDGTTIDHVLVYQDPRLFALFETGSPVRR*