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SCNpilot_cont_1000_bf_scaffold_4416_1

Organism: SCNPILOT_CONT_300_BF_Microbacterium_70_39_partial

partial RP 40 / 55 BSCG 40 / 51 MC: 1 ASCG 10 / 38
Location: 3..593

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.6
  • Coverage: 196.0
  • Bit_score: 318
  • Evalue 7.60e-84
mfd; transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] similarity KEGG
DB: KEGG
  • Identity: 79.1
  • Coverage: 196.0
  • Bit_score: 297
  • Evalue 3.10e-78
transcription-repair coupling factor n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003814830 similarity UNIREF
DB: UNIREF100
  • Identity: 88.4
  • Coverage: 190.0
  • Bit_score: 329
  • Evalue 3.10e-87

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Taxonomy

Microbacterium sp. TS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 591
GGCGCGGAGCAGGCCGGCCACATCGCCGGCGTCGGGTTCGATCTCTATCTGCGGATGATCGGCGAGGCCGTCGCGACATTCCGCGGCGACGAGACAGAGTCGCCCGTCGAACTGCGGCTCGAGCTGCCCGTGCAGGCGCGCATCCCGGAGTCGTACATCGACAGCGAGCGGCTCCGGCTCGAGGCGTACCAGAAGCTCTCGGCGGCGGCATCTGCGACCGCGAAGGACGATGCCATCGACCTCGTGGTCGACGAACTCCGCGACCGCTATGGCGAGCCGCCCGCCGAGGTGGAGGGGCTGCTCGCGATCGCCCGCCTGCGCCGCCGCGCCGCCCAGGCGGGGCTGACGGACGTCGTCGCGATGGGCCCGAACCTGCGCATCGCCCCCGCTCGGCTGCCCGACTCGATGCGTGTGCGCCTGCAGCGGCTCCACCCGAAGGCGAAGCTGCTCTCCGGCGGCGAGGCGCTCGTGGTTCCGCTCCCCGGGGCGGGAGGCGAGCCGCTCGGCGACCCCGAGCTGATCGCCTGGGTGGGTCAGCTGCTCGAGCAGCTCTGGCCCGCACCGGCCCCCGCGCCTGCCGACGCCTCGTAG
PROTEIN sequence
Length: 197
GAEQAGHIAGVGFDLYLRMIGEAVATFRGDETESPVELRLELPVQARIPESYIDSERLRLEAYQKLSAAASATAKDDAIDLVVDELRDRYGEPPAEVEGLLAIARLRRRAAQAGLTDVVAMGPNLRIAPARLPDSMRVRLQRLHPKAKLLSGGEALVVPLPGAGGEPLGDPELIAWVGQLLEQLWPAPAPAPADAS*