ggKbase home page

SCNpilot_cont_1000_bf_scaffold_1527

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_1527_1
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

91..2514
DNA (2424bp) protein (808aa)
Lead, cadmium, zinc and mercury transporting ATPase Copper-translocating P-type ATPase {ECO:0000313|EMBL:CCU61309.1}; EC=3.6.3.3 {ECO:0000313|EMBL:CCU61309.1};; EC=3.6.3.4 {ECO:0000313|EMBL:CCU61309.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
heavy metal translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] rbh
Lead, cadmium, zinc and mercury transporting ATPase Copper-translocating P-type ATPase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFW8_9PROT rbh
SCNpilot_cont_1000_bf_scaffold_1527_2
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2550..2759
DNA (210bp) protein (70aa)
Copper ion binding protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DPE8_9PROT
Copper ion binding protein {ECO:0000313|EMBL:CCU61310.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
heavy metal transport/detoxification protein
SCNpilot_cont_1000_bf_scaffold_1527_3
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2734..3051
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DF28_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU61311.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_1527_4
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3245..4027
DNA (783bp) protein (261aa)
Probable cytochrome c2 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DG52_9PROT rbh
Cytochrome C553 {ECO:0000313|EMBL:KIO47859.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
cytochrome c rbh
SCNpilot_cont_1000_bf_scaffold_1527_5
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4024..5355
DNA (1332bp) protein (444aa)
Putative diheme cytochrome c-553 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DGH4_9PROT rbh
Alcohol dehydrogenase {ECO:0000313|EMBL:KIO47840.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
cytochrome c, class I rbh
SCNpilot_cont_1000_bf_scaffold_1527_6
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5395..6561)
DNA (1167bp) protein (389aa)
Sulfate transporter family protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJY1_9PROT
Sulfate transporter {ECO:0000313|EMBL:KIO50181.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
sulfate transporter
SCNpilot_cont_1000_bf_scaffold_1527_7
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7279..9534)
DNA (2256bp) protein (752aa)
TonB-dependent receptor n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJK0_9PROT rbh
TonB-dependent receptor {ECO:0000313|EMBL:CCU62902.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein rbh
SCNpilot_cont_1000_bf_scaffold_1527_8
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9555..9809
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DU47_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO48172.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SCNpilot_cont_1000_bf_scaffold_1527_9
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9968..10474)
DNA (507bp) protein (169aa)
Cupin domain protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DK32_9PROT
Cupin domain protein {ECO:0000313|EMBL:CCU62898.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
cupin
SCNpilot_cont_1000_bf_scaffold_1527_10
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10923..11117)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJJ6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO48173.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SCNpilot_cont_1000_bf_scaffold_1527_11
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11285..12004)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DU44_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU62895.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_1527_12
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12152..12592)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y941_NITMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB74730.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_1000_bf_scaffold_1527_13
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12794..13753)
DNA (960bp) protein (320aa)
ABC-3 protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9N8_NITMU rbh
hypothetical protein; K02075 zinc/manganese transport system permease protein rbh
ABC-3 protein {ECO:0000313|EMBL:ABB74533.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
SCNpilot_cont_1000_bf_scaffold_1527_14
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13753..14586)
DNA (834bp) protein (278aa)
ABC transporter related protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9N7_NITMU rbh
ABC transporter {ECO:0000313|EMBL:KIO47935.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
ABC transporter-like protein; K02074 zinc/manganese transport system ATP-binding protein rbh
SCNpilot_cont_1000_bf_scaffold_1527_15
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14558..14872)
DNA (315bp) protein (105aa)
Periplasmic solute binding protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y9N6_NITMU
periplasmic solute binding protein; K02077 zinc/manganese transport system substrate-binding protein
Periplasmic solute binding protein {ECO:0000313|EMBL:ABB74535.1}; Flags: Precursor;; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Displaying 15 items

View Taxonomy