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SCNpilot_cont_1000_bf_scaffold_1669

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_1669_1
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..695)
DNA (693bp) protein (231aa)
3-demethylubiquinone-9 3-methyltransferase (EC:2.1.1.64); K00568 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] rbh
Ubiquinone biosynthesis O-methyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJ26_9PROT rbh
Ubiquinone biosynthesis O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472, ECO:0000256|SAAS:SAAS00063564}; 2-polyprenyl-6-hydroxyphenol methylase {ECO:0000256|HAMAP-Rule:MF_00472}; 3-demethylubiquinone 3-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
SCNpilot_cont_1000_bf_scaffold_1669_2
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(689..2050)
DNA (1362bp) protein (454aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase {ECO:0000256|HAMAP-Rule:MF_01281}; Short=MTA/SAH deaminase {ECO:0000256|HAMAP-Rule:MF_01281};; EC=3.5.4.28 {ECO:0000256|HAMAP-Rule:MF_01281};; EC=3.5.4.31 {ECO:0000256|HAMAP-Rule:MF_01281};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
5-methylthioadenosine/S-adenosylhomocysteine deaminase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKM5_9PROT rbh
N-ethylammeline chlorohydrolase rbh
SCNpilot_cont_1000_bf_scaffold_1669_3
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2137..2811)
DNA (675bp) protein (225aa)
OmpA/MotB n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6Z1_NITMU rbh
Membrane protein {ECO:0000313|EMBL:KIO50014.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
OmpA/MotB; K03286 OmpA-OmpF porin, OOP family rbh
SCNpilot_cont_1000_bf_scaffold_1669_4
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3114..5660
DNA (2547bp) protein (849aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
DNA gyrase subunit A; K02469 DNA gyrase subunit A [EC:5.99.1.3] rbh
DNA gyrase subunit A n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKJ9_9PROT rbh
SCNpilot_cont_1000_bf_scaffold_1669_5
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5703..6797
DNA (1095bp) protein (365aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
phosphoserine aminotransferase (EC:2.6.1.52); K00831 phosphoserine aminotransferase [EC:2.6.1.52] rbh
Phosphoserine aminotransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DVP0_9PROT rbh
SCNpilot_cont_1000_bf_scaffold_1669_6
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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6790..7989
DNA (1200bp) protein (400aa)
D-isomer specific 2-hydroxyacid dehydrogenase; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] rbh
D-3-phosphoglycerate dehydrogenase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJ30_9PROT rbh
3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:KIO50017.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SCNpilot_cont_1000_bf_scaffold_1669_7
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8012..9076
DNA (1065bp) protein (355aa)
chorismate mutase; K14170 chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] rbh
Chorismate mutase I / Prephenate dehydratase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DL80_9PROT rbh
Prephenate dehydratase {ECO:0000313|EMBL:KIO50018.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SCNpilot_cont_1000_bf_scaffold_1669_8
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9264..10370
DNA (1107bp) protein (369aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
histidinol-phosphate aminotransferase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] rbh
Biosynthetic Aromatic amino acid aminotransferase beta n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKK2_9PROT rbh
SCNpilot_cont_1000_bf_scaffold_1669_9
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10398..11402
DNA (1005bp) protein (335aa)
2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta {ECO:0000313|EMBL:CCU63405.1}; EC=2.5.1.54 {ECO:0000313|EMBL:CCU63405.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
phospho-2-dehydro-3-deoxyheptonate aldolase; K03856 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] rbh
2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta n=1 Tax=Nitrosospira sp. APG3 RepID=M5DVP4_9PROT rbh
SCNpilot_cont_1000_bf_scaffold_1669_10
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11418..12350
DNA (933bp) protein (311aa)
prephenate dehydrogenase (EC:1.3.1.12); K04517 prephenate dehydrogenase [EC:1.3.1.12] rbh
Prephenate dehydrogenase {ECO:0000313|EMBL:ABB75487.1}; EC=1.3.1.12 {ECO:0000313|EMBL:ABB75487.1};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
Prephenate dehydrogenase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y6Y4_NITMU rbh
SCNpilot_cont_1000_bf_scaffold_1669_11
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12571..12921
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DL83_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU63408.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_1669_12
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13143..13511
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJ39_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO50121.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_1669_13
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

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13576..14280
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Microbacterium paraoxydans RepID=UPI000374E618
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
SCNpilot_cont_1000_bf_scaffold_1669_14
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14457..15350)
DNA (894bp) protein (298aa)
Putative uncharacterized protein n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IR67_9GAMM rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EGW23714.1}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylobacter tundripaludum SV96.;"
hypothetical protein rbh
SCNpilot_cont_1000_bf_scaffold_1669_15
unknown

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15378..15440
DNA (63bp) protein (21aa)

This feature has no annotations

Displaying 15 items

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