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SCNpilot_cont_1000_bf_scaffold_9140

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_9140_1
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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1..630
DNA (630bp) protein (210aa)
hypoxanthine-guanine phosphoribosyltransferase (EC:2.4.2.8); K00760 hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
Hypoxanthine-guanine phosphoribosyltransferase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFM8_9PROT
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:KIO50244.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SCNpilot_cont_1000_bf_scaffold_9140_2
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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706..1452
DNA (747bp) protein (249aa)
Probable 6-oxopurine nucleoside phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01963};; Purine nucleoside phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
5'-methylthioadenosine phosphorylase (EC:2.4.2.1); K00772 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] rbh
Probable 6-oxopurine nucleoside phosphorylase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DEY1_9PROT rbh
SCNpilot_cont_1000_bf_scaffold_9140_3
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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1442..1975
DNA (534bp) protein (178aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
def; peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88]
Peptide deformylase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DNN3_9PROT rbh
SCNpilot_cont_1000_bf_scaffold_9140_4
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2004..2630)
DNA (627bp) protein (209aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
shikimate kinase (EC:2.7.1.71); K00891 shikimate kinase [EC:2.7.1.71]
Shikimate kinase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFG6_9PROT
SCNpilot_cont_1000_bf_scaffold_9140_5
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2903..3229)
DNA (327bp) protein (109aa)
Uncharacterized protein {ECO:0000313|EMBL:KIO50241.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SCNpilot_cont_1000_bf_scaffold_9140_6
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3279..3533)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFM5_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU61072.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
Displaying 6 items

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