name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_1000_bf_scaffold_776_1
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
124..642
|
Iron-sulfur cluster regulator IscR n=1 Tax=Nitrosospira sp. APG3 RepID=M5DEX0_9PROT
Iron-sulfur cluster regulator IscR {ECO:0000313|EMBL:CCU61021.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
BadM/Rrf2 family transcriptional regulator
|
|
SCNpilot_cont_1000_bf_scaffold_776_2
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
701..1042
|
Iron binding protein IscA for iron-sulfur cluster assembly n=1 Tax=Nitrosospira sp. APG3 RepID=M5DNI6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO50202.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
iron-sulfur cluster assembly accessory protein; K13628 iron-sulfur cluster assembly protein
|
|
SCNpilot_cont_1000_bf_scaffold_776_3
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1146..2582
|
Iron-regulated ABC transporter membrane component SufB n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YB68_NITMU
rbh
cysteine desulfurase activator complex subunit SufB; K09014 Fe-S cluster assembly protein SufB
rbh
Iron-regulated ABC transporter membrane component SufB {ECO:0000313|EMBL:ABB74003.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
|
|
SCNpilot_cont_1000_bf_scaffold_776_4
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2579..3367
|
Iron-sulfur cluster assembly ATPase protein SufC n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFS0_9PROT
rbh
Iron-sulfur cluster assembly ATPase protein SufC {ECO:0000313|EMBL:CCU61018.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
FeS assembly ATPase SufC; K09013 Fe-S cluster assembly ATP-binding protein
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_776_5
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3370..4686
|
Iron-sulfur cluster assembly protein SufD n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFJ5_9PROT
rbh
Fe-S cluster assembly protein SufD {ECO:0000313|EMBL:KIO50500.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
FeS assembly protein SufD; K09015 Fe-S cluster assembly protein SufD
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_776_6
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4732..5949
|
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
SufS subfamily cysteine desulfurase; K11717 cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
rbh
Cysteine desulfurase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DEW9_9PROT
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_776_7
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5966..6448
|
Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2 n=1 Tax=Nitrosospira sp. APG3 RepID=M5DNI2_9PROT
Nitrogen fixation protein NifU {ECO:0000313|EMBL:KIO50198.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
SUF system FeS assembly protein; K04488 nitrogen fixation protein NifU and related proteins
|
|
SCNpilot_cont_1000_bf_scaffold_776_8
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6491..7051
|
Nitrogen-fixing NifU-like protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YB63_NITMU
rbh
Nitrogen fixation protein NifU {ECO:0000313|EMBL:KIO50197.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
nitrogen-fixing NifU-like
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_776_9
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7351..7764
|
Protoporphyrinogen IX oxidase, novel form, HemJ n=1 Tax=Nitrosospira sp. APG3 RepID=M5DTZ5_9PROT
Protoporphyrinogen IX oxidase, novel form, HemJ {ECO:0000313|EMBL:CCU62835.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein; K08973 putative membrane protein
|
|
SCNpilot_cont_1000_bf_scaffold_776_10
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7834..8934
|
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
3-dehydroquinate synthase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJG0_9PROT
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_776_11
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8927..10057
|
Deoxyguanosinetriphosphate triphosphohydrolase-like protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJY9_9PROT
rbh
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
|
|
SCNpilot_cont_1000_bf_scaffold_776_12
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10327..11394
|
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37); K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37]
rbh
Uroporphyrinogen decarboxylase n=1 Tax=Nitrosospira sp. APG3 RepID=M5DTZ9_9PROT
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_776_13
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11536..12219
|
DNA-binding response regulator n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJG3_9PROT
rbh
Chemotaxis protein CheY {ECO:0000313|EMBL:KIO50192.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
two component transcriptional regulator
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_776_14
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12206..13474
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:KIO50191.1}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Two-component system sensor protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJZ2_9PROT
rbh
periplasmic sensor signal transduction histidine kinase
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_776_15
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13731..14849
|
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJD4_9PROT
rbh
Uncharacterized protein {ECO:0000313|EMBL:CCU62844.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
hypothetical protein
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_776_16
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14982..16478)
|
proton-translocating NADH-quinone oxidoreductase, chain M; K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3]
rbh
NADH-ubiquinone oxidoreductase chain M n=1 Tax=Nitrosospira sp. APG3 RepID=M5DHP7_9PROT
rbh
Oxidoreductase {ECO:0000313|EMBL:KIO50189.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
|
|
SCNpilot_cont_1000_bf_scaffold_776_17
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16471..18033)
|
NADH-ubiquinone oxidoreductase chain M {ECO:0000313|EMBL:CCU62847.1}; EC=1.6.5.3 {ECO:0000313|EMBL:CCU62847.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
proton-translocating NADH-quinone oxidoreductase subunit M (EC:1.6.99.5); K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3]
rbh
NADH-ubiquinone oxidoreductase chain M n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJG6_9PROT
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_776_18
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18041..19672)
|
NADH-ubiquinone oxidoreductase chain L n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJZ6_9PROT
rbh
NADH-ubiquinone oxidoreductase {ECO:0000313|EMBL:KIO50188.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
NADH/Ubiquinone/plastoquinone (complex I)
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_776_19
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19677..21431)
|
||
SCNpilot_cont_1000_bf_scaffold_776_20
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21476..22807)
|
UPF0753 protein Mettu_2060 n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IXF8_9GAMM
UPF0753 protein SQ11_00255 {ECO:0000256|HAMAP-Rule:MF_01871}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein; K09822 hypothetical protein
|
|
SCNpilot_cont_1000_bf_scaffold_776_21
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22810..24234)
|
NADH-ubiquinone oxidoreductase chain M {ECO:0000313|EMBL:CCU63093.1}; EC=1.6.5.3 {ECO:0000313|EMBL:CCU63093.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
proton-translocating NADH-quinone oxidoreductase subunit M (EC:1.6.99.5); K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3]
rbh
NADH-ubiquinone oxidoreductase chain M n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKJ3_9PROT
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_776_22
unknown
|
Not on your lists |
comp(24361..24849)
|
This feature has no annotations |
|
SCNpilot_cont_1000_bf_scaffold_776_23
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25129..26106
|
Putative sodium-dependent bicarbonate transporter n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJN1_9PROT
rbh
Sodium-dependent bicarbonate transporter {ECO:0000313|EMBL:KIO49126.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein; K07086
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_776_24
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26224..26553
|
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DUC9_9PROT
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:KIO49125.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
|
|
SCNpilot_cont_1000_bf_scaffold_776_25
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27018..27509
|
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJV7_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO50182.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
|
|
SCNpilot_cont_1000_bf_scaffold_776_26
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28811..30160
|
Sulfate transporter family protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJY1_9PROT
rbh
Sulfate transporter {ECO:0000313|EMBL:KIO50181.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
sulfate transporter
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_776_27
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30255..30677
|
UspA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DI96_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KIO50180.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
UspA domain-containing protein
|
|
SCNpilot_cont_1000_bf_scaffold_776_28
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30931..31515
|
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJV3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU63084.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
AIG2 family protein
|
|
SCNpilot_cont_1000_bf_scaffold_776_29
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31798..32697)
|
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DKI4_9PROT
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_776_30
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(32694..33035)
|
phhB; pterin-4-alpha-carbinolamine dehydratase (EC:4.2.1.96); K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000255|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000255|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000255|HAMAP-Rule:MF_00434};; 4-alpha-hydroxy-tetrahydropterin dehydratase {ECO:0000255|HAMAP-Rule:MF_00434}; Pterin carbinolamine dehydratase {ECO:0000255|HAMAP-Rule:MF_00434}; Short=PCD {ECO:0000255|HAMAP-Rule:MF_00434};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospi
Putative pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=PHS_NITMU
|