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SCNpilot_cont_1000_bf_scaffold_1875

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_1875_1
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..1205
DNA (1203bp) protein (401aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
beta-galactosidase (EC:3.2.1.23); K12308 beta-galactosidase [EC:3.2.1.23]
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI000315017C rbh
SCNpilot_cont_1000_bf_scaffold_1875_2
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1246..2190
DNA (945bp) protein (315aa)
dgoK; 2-keto-3-deoxy-galactonokinase; K00883 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58]
2-keto-3-deoxy-galactonokinase n=1 Tax=Rhodanobacter sp. 115 RepID=I4VWV8_9GAMM
2-keto-3-deoxy-galactonokinase {ECO:0000313|EMBL:EIL91699.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
SCNpilot_cont_1000_bf_scaffold_1875_3
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2184..2828
DNA (645bp) protein (215aa)
2-dehydro-3-deoxyphosphogalactonate aldolase (EC:4.1.2.21)
2-keto-3-deoxy-6-phosphogalactonate aldolase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ10_9GAMM rbh
2-keto-3-deoxy-6-phosphogalactonate aldolase {ECO:0000313|EMBL:EIL89301.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
SCNpilot_cont_1000_bf_scaffold_1875_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2825..3973
DNA (1149bp) protein (383aa)
mandelate racemase/muconate lactonizing enzyme, N-terminal domain-containing protein 3 (EC:4.2.1.-); K01684 galactonate dehydratase [EC:4.2.1.6]
Galactonate dehydratase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEL8_9GAMM rbh
Galactonate dehydratase {ECO:0000313|EMBL:EIL97909.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_cont_1000_bf_scaffold_1875_5
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4014..4778
DNA (765bp) protein (255aa)
putative short-chain alcohol dehydrogenase (EC:1.1.-.-) rbh
Short-chain dehydrogenase/reductase SDR n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ12_9GAMM rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EIL89303.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
SCNpilot_cont_1000_bf_scaffold_1875_6
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4775..5689
DNA (915bp) protein (305aa)
SMP-30/gluconolaconase/LRE domain-containing protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ13_9GAMM rbh
SMP-30/gluconolaconase/LRE domain-containing protein {ECO:0000313|EMBL:EIL89304.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
L-arabinonolactonase rbh
SCNpilot_cont_1000_bf_scaffold_1875_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5749..7137
DNA (1389bp) protein (463aa)
MFS transporter, SP family protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VVX3_9GAMM rbh
MFS transporter, SP family protein {ECO:0000313|EMBL:EIL91364.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
MFS transporter, SP family; K08137 MFS transporter, SP family, galactose:H+ symporter rbh
SCNpilot_cont_1000_bf_scaffold_1875_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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7187..8623
DNA (1437bp) protein (479aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036E062A rbh
amino acid permease-associated protein rbh
Tax=GWC2_Gemmatimonadetes_71_10_curated
SCNpilot_cont_1000_bf_scaffold_1875_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8804..9127)
DNA (324bp) protein (108aa)
ABC transporter ATP-binding protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WZK8_9GAMM
ABC-type multidrug transport system, ATPase and permease component
ABC-type multidrug transport system, ATPase and permease component {ECO:0000313|EMBL:AGG87846.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Displaying 9 items

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