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SCNpilot_cont_1000_bf_scaffold_2861

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_2861_1
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..3000
DNA (3000bp) protein (1000aa)
RecBCD enzyme subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01485};; Exonuclease V subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; Helicase/nuclease RecBCD subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
Exodeoxyribonuclease V subunit beta n=1 Tax=Rhodanobacter sp. 115 RepID=I4W828_9GAMM rbh
exodeoxyribonuclease V subunit beta
SCNpilot_cont_1000_bf_scaffold_2861_2
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2990..4963
DNA (1974bp) protein (658aa)
RecBCD enzyme subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01487};; Exonuclease V subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; Helicase/nuclease RecBCD subunit RecD {ECO:0000256|HAMAP-Rule:MF_01487}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Exodeoxyribonuclease V subunit alpha n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VME0_9GAMM
recD; exodeoxyribonuclease V, alpha subunit
SCNpilot_cont_1000_bf_scaffold_2861_3
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5181..5459
DNA (279bp) protein (93aa)
HigB toxin protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CX11_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KGM53023.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concretionis Ko07 = DSM 16239.;"
addiction module, toxin; K07334 proteic killer suppression protein
SCNpilot_cont_1000_bf_scaffold_2861_4

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5474..5758
DNA (285bp) protein (95aa)
Addiction module antidote protein, HigA n=1 Tax=mine drainage metagenome RepID=T1BNN4_9ZZZZ
Addiction module antidote protein, HigA {ECO:0000313|EMBL:EQD68261.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
addiction module, antitoxin
SCNpilot_cont_1000_bf_scaffold_2861_5
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6101..6682)
DNA (582bp) protein (194aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L4L3_FRAAD
Signal peptide protein {ECO:0000313|EMBL:AHX12645.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
prepilin-type N-terminal cleavage/methylation domain-containing protein; K08084 type IV fimbrial biogenesis protein FimT
SCNpilot_cont_1000_bf_scaffold_2861_6
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6688..6999)
DNA (312bp) protein (104aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L4L4_FRAAD
Uncharacterized protein {ECO:0000313|EMBL:KJV28057.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
prepilin-type N-terminal cleavage/methylation domain-containing protein; K02655 type IV pilus assembly protein PilE
SCNpilot_cont_1000_bf_scaffold_2861_7
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6989..8737)
DNA (1749bp) protein (583aa)
Type 4 fimbrial biogenesis protein PilY1 n=1 Tax=mine drainage metagenome RepID=T0Z274_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:AHX16112.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
Tfp pilus assembly protein, tip-associated adhesin PilY1; K02674 type IV pilus assembly protein PilY1
Displaying 7 items

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