ggKbase home page

SCNpilot_cont_1000_bf_scaffold_9706

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_9706_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..586)
DNA (585bp) protein (195aa)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Rhodanobacter denitrificans RepID=I4WYD8_9GAMM
N-acetylmuramoyl-L-alanine amidase
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:AGG89671.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_1000_bf_scaffold_9706_2
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(767..1240)
DNA (474bp) protein (158aa)
ATPase, YjeE family n=1 Tax=Rhodanobacter denitrificans RepID=M4NHU4_9GAMM
ATPase, YjeE family
ATPase, YjeE family {ECO:0000313|EMBL:AGG89672.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_1000_bf_scaffold_9706_3
RIFOXYA1_FULL_Brevundimonas_67_7_curated, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1237..1539)
DNA (303bp) protein (101aa)
YjeF-like protein, hydroxyethylthiazole kinase-related protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W418_9GAMM
yjeF-like protein, hydroxyethylthiazole kinase-related protein
Tax=RIFOXYA1_FULL_Brevundimonas_67_7_curated
SCNpilot_cont_1000_bf_scaffold_9706_4
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1524..2522)
DNA (999bp) protein (333aa)
YjeF-like protein, hydroxyethylthiazole kinase-related protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WYD6_9GAMM
yjeF-like protein, hydroxyethylthiazole kinase-related protein
YjeF-like protein, hydroxyethylthiazole kinase-related protein {ECO:0000313|EMBL:AGG89673.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_1000_bf_scaffold_9706_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2552..3646
DNA (1095bp) protein (365aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Epoxyqueuosine reductase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WB15_9GAMM rbh
iron-sulfur cluster binding protein, putative
SCNpilot_cont_1000_bf_scaffold_9706_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3698..4156)
DNA (459bp) protein (153aa)
L-aspartate 1-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Aspartate 1-decarboxylase n=1 Tax=Rhodanobacter denitrificans RepID=I4WYD4_9GAMM
SCNpilot_cont_1000_bf_scaffold_9706_7
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4188..4646)
DNA (459bp) protein (153aa)
pantothenate synthetase (EC:6.3.2.1)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247609}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247611};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247610}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacte
Pantothenate synthetase n=1 Tax=Rhodanobacter denitrificans RepID=M4NPX0_9GAMM
SCNpilot_cont_1000_bf_scaffold_9706_8
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4861..5469)
DNA (609bp) protein (203aa)
ketopantoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NHU9_9GAMM
SCNpilot_cont_1000_bf_scaffold_9706_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5582..6067)
DNA (486bp) protein (162aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Rhodanobacter denitrificans RepID=I4WYD1_9GAMM
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:AGG89678.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_1000_bf_scaffold_9706_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6064..6918)
DNA (855bp) protein (285aa)
Poly(A) polymerase I {ECO:0000256|HAMAP-Rule:MF_00957}; Short=PAP I {ECO:0000256|HAMAP-Rule:MF_00957};; EC=2.7.7.19 {ECO:0000256|HAMAP-Rule:MF_00957};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Poly(A) polymerase I n=1 Tax=Rhodanobacter denitrificans RepID=I4WYD0_9GAMM
poly(A) polymerase
Displaying 10 items

View Taxonomy