ggKbase home page

SCNpilot_cont_1000_bf_scaffold_948

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_948_1
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1386
DNA (1386bp) protein (462aa)
Heavy metal efflux pump n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WMC2_9GAMM
putative AcrA/AcrD/AcrF family protein; K15726 cobalt-zinc-cadmium resistance protein CzcA
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_1000_bf_scaffold_948_2
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1497..2831
DNA (1335bp) protein (445aa)
UPI0003CEB033 related cluster n=1 Tax=unknown RepID=UPI0003CEB033 rbh
Hemolysin {ECO:0000313|EMBL:ESW75481.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hemolysin protein rbh
SCNpilot_cont_1000_bf_scaffold_948_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2858..3850)
DNA (993bp) protein (331aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIF7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL99248.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein rbh
SCNpilot_cont_1000_bf_scaffold_948_4
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3940..5160)
DNA (1221bp) protein (407aa)
ABC transporter permease n=1 Tax=Ochrobactrum anthropi RepID=UPI000287ACA8 rbh
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AFL51304.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
SCNpilot_cont_1000_bf_scaffold_948_5
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5245..6186
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NL28_9GAMM rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGG88451.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_1000_bf_scaffold_948_6
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6183..7115
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5LA16_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EQM88076.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
protein of unknown function (DUF1259) rbh
SCNpilot_cont_1000_bf_scaffold_948_7
Pandoraea oxalativorans, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7380..8828
DNA (1449bp) protein (483aa)
Chromate transporter, chromate ion transporter (CHR) family n=2 Tax=Burkholderia vietnamiensis (strain G4 / LMG 22486) RepID=A4JRX3_BURVG rbh
Chromate transporter {ECO:0000313|EMBL:AKC72491.1}; TaxID=573737 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea oxalativorans.;"
chromate transporter rbh
SCNpilot_cont_1000_bf_scaffold_948_8
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8886..9104)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0003693D81
DNA-binding protein {ECO:0000313|EMBL:AIF48160.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_948_9
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9307..10137
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035F670E
Uncharacterized protein {ECO:0000313|EMBL:AIF48161.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
SCNpilot_cont_1000_bf_scaffold_948_10
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10186..10470
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4VPQ7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89198.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_948_11
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10623..11690
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034946FE
Uncharacterized protein {ECO:0000313|EMBL:KFN42955.1}; TaxID=1121015 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_948_12
Xanthomonas alfalfae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11902..13203
DNA (1302bp) protein (434aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI0003473575
Integrase
Integrase {ECO:0000313|EMBL:AEO42409.1}; TaxID=981368 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. citrumelo F1.;"
SCNpilot_cont_1000_bf_scaffold_948_13
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13234..16275
DNA (3042bp) protein (1014aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034C378B
Transposase {ECO:0000313|EMBL:EKQ58382.1}; TaxID=1127439 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. malvacearum str. GSPB2388.;"
Tn5044 transposase
SCNpilot_cont_1000_bf_scaffold_948_14
unknown

Not on your lists

16372..16434
DNA (63bp) protein (21aa)

This feature has no annotations

Displaying 14 items

View Taxonomy