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SCNpilot_cont_1000_bf_scaffold_968

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_968_1
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..402
DNA (402bp) protein (134aa)
cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase; K04084 thiol:disulfide interchange protein DsbD [EC:1.8.1.8]
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000363BE64
Protein-disulfide reductase {ECO:0000313|EMBL:KGI78770.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
SCNpilot_cont_1000_bf_scaffold_968_2

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447..956
DNA (510bp) protein (170aa)
Uncharacterized protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T0YKJ9_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD32452.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_968_3
unknown

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977..1150
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_968_4
unknown

Not on your lists

1172..1687
DNA (516bp) protein (172aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_968_5
Alcanivorax sp. 19-m-6, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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1900..2265
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Vibrio sp. 23023 RepID=A9M4R0_9VIBR
Uncharacterized protein {ECO:0000313|EMBL:KGD63369.1}; TaxID=1177154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax sp. 19-m-6.;"
SCNpilot_cont_1000_bf_scaffold_968_6
unknown

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2262..2540
DNA (279bp) protein (93aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_968_7
unknown

Not on your lists

2563..3141
DNA (579bp) protein (193aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_968_8
unknown

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3141..3584
DNA (444bp) protein (148aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_968_9
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3668..4195
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=M4NE14_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89000.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_1000_bf_scaffold_968_10
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4338..4604
DNA (267bp) protein (89aa)
Uncharacterized protein {ECO:0000313|EMBL:AHX16331.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
SCNpilot_cont_1000_bf_scaffold_968_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4636..4899
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WXV0_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG89144.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
SCNpilot_cont_1000_bf_scaffold_968_12
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4913..5656
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B424F3
Uncharacterized protein {ECO:0000313|EMBL:KJV25167.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_968_13
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5741..6343
DNA (603bp) protein (201aa)
DNA polymerase V n=1 Tax=Dyella ginsengisoli RepID=UPI00036E7E17
DNA polymerase V {ECO:0000313|EMBL:AHX13513.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
SOS mutagenesis protein UmuD
SCNpilot_cont_1000_bf_scaffold_968_14
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6413..7726
DNA (1314bp) protein (438aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000377121C rbh
UMUC domain-containing protein DNA-repair protein
UMUC domain-containing protein DNA-repair protein {ECO:0000313|EMBL:BAN36837.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella denitrificans skB26.;"
SCNpilot_cont_1000_bf_scaffold_968_15
Acidithiobacillus caldus, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8546..10399)
DNA (1854bp) protein (618aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036481F0 rbh
Transposase, IS605 OrfB {ECO:0000313|EMBL:AIA55437.1}; TaxID=637389 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus caldus ATCC 51756.;"
SCNpilot_cont_1000_bf_scaffold_968_16
unknown

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comp(10630..10953)
DNA (324bp) protein (108aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_968_17
unknown

Not on your lists

comp(10984..11205)
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_968_18
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11311..11853)
DNA (543bp) protein (181aa)
KorF repressor protein n=2 Tax=Bacteria RepID=Q0E678_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:KJX85290.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
SCNpilot_cont_1000_bf_scaffold_968_19
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11929..12306)
DNA (378bp) protein (126aa)
Uncharacterized protein n=2 Tax=Pseudomonas aeruginosa RepID=U8PYC6_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:KFC64012.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_968_20
Xanthomonas fuscans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12383..13519)
DNA (1137bp) protein (379aa)
Gp37Gp68 family protein n=1 Tax=Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535 RepID=D4T9X9_9XANT rbh
Gp37Gp68 family protein {ECO:0000313|EMBL:EFF46491.1}; TaxID=427082 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535.;"
phage Gp37Gp68 family protein
SCNpilot_cont_1000_bf_scaffold_968_21
Xanthomonas vesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13783..16260
DNA (2478bp) protein (826aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=925775 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vesicatoria ATCC 35937.;"
ATP-dependent DNA helicase II (Rep); K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
DNA/RNA helicase, superfamily I n=1 Tax=Xanthomonas vesicatoria ATCC 35937 RepID=F0BKI1_9XANT
SCNpilot_cont_1000_bf_scaffold_968_22
Pseudoalteromonas lipolytica, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16208..17422
DNA (1215bp) protein (405aa)
Uncharacterized protein {ECO:0000313|EMBL:EWH04416.1}; TaxID=1452721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas lipolytica SCSIO 04301.;"
SCNpilot_cont_1000_bf_scaffold_968_23
unknown

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17482..17991
DNA (510bp) protein (170aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_968_24
unknown

Not on your lists

18026..18211
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_968_25
unknown

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18436..19377
DNA (942bp) protein (314aa)

This feature has no annotations

Displaying 25 items

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