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SCNpilot_cont_1000_bf_scaffold_3018

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_3018_1
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..1913
DNA (1911bp) protein (637aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
Parvulin-like peptidyl-prolyl isomerase n=1 Tax=Rhodanobacter denitrificans RepID=I4WR62_9GAMM rbh
parvulin-like peptidyl-prolyl isomerase rbh
SCNpilot_cont_1000_bf_scaffold_3018_2
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2026..3195)
DNA (1170bp) protein (390aa)
Membrane-bound lytic murein transglycosylase D n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJX4_9GAMM
Membrane-bound lytic murein transglycosylase D {ECO:0000313|EMBL:EIL87515.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
LysM repeat-containing protein
SCNpilot_cont_1000_bf_scaffold_3018_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3192..3956)
DNA (765bp) protein (255aa)
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374, ECO:0000256|SAAS:SAAS00035352};; Glyoxalase II {ECO:0000256|HAMAP-Rule:MF_01374}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Hydroxyacylglutathione hydrolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPJ7_9GAMM
hydroxyacylglutathione hydrolase
SCNpilot_cont_1000_bf_scaffold_3018_4
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4195..4896
DNA (702bp) protein (234aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPJ8_9GAMM
methylase involved in ubiquinone/menaquinone biosynthesis
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_1000_bf_scaffold_3018_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4903..5346
DNA (444bp) protein (148aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Ribonuclease H n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPJ9_9GAMM
ribonuclease HI
SCNpilot_cont_1000_bf_scaffold_3018_6
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5343..6047
DNA (705bp) protein (235aa)
DNA polymerase III, epsilon subunit (EC:2.7.7.7)
DNA polymerase III, epsilon subunit {ECO:0000313|EMBL:AGG89361.1}; EC=2.7.7.7 {ECO:0000313|EMBL:AGG89361.1};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
DNA polymerase III subunit epsilon n=1 Tax=Rhodanobacter denitrificans RepID=I4WR67_9GAMM
SCNpilot_cont_1000_bf_scaffold_3018_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6066..6767)
DNA (702bp) protein (234aa)
Protein phosphatase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WPK1_9GAMM rbh
serine/threonine protein phosphatase rbh
Protein phosphatase {ECO:0000313|EMBL:EIM01393.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_cont_1000_bf_scaffold_3018_8
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7057..8148)
DNA (1092bp) protein (364aa)
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854};; Pyruvate, water dikinase {ECO:0000256|PIRNR:PIRNR000854}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
phosphoenolpyruvate synthase (EC:2.7.9.2)
Phosphoenolpyruvate synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W6P1_9GAMM
SCNpilot_cont_1000_bf_scaffold_3018_9
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

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8336..9160
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Cronobacter malonaticus 507 RepID=K8BY09_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KIJ70764.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
Displaying 9 items

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