ggKbase home page

SCNpilot_cont_1000_bf_scaffold_7981

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_7981_1
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3..383)
DNA (381bp) protein (127aa)
50S ribosomal protein L17 n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=RL17_METS4
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17
SCNpilot_cont_1000_bf_scaffold_7981_2
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(383..1399)
DNA (1017bp) protein (339aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000255|HAMAP-Rule:MF_00059}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] rbh
DNA-directed RNA polymerase subunit alpha n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=RPOA_PARL1 rbh
SCNpilot_cont_1000_bf_scaffold_7981_3
Phaeospirillum fulvum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1490..1885)
DNA (396bp) protein (132aa)
30S ribosomal protein S11 n=4 Tax=Rhodospirillaceae RepID=RS11_MAGSA
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1316936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum fulvum MGU-K5.;"
SCNpilot_cont_1000_bf_scaffold_7981_4
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists


comp(1887..2264)
DNA (378bp) protein (126aa)
30S ribosomal protein S13 n=1 Tax=Ponticaulis koreensis RepID=UPI0003B4AD58
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13
SCNpilot_cont_1000_bf_scaffold_7981_5
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2700..3848
DNA (1149bp) protein (383aa)
amidohydrolase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A3F0 rbh
amidohydrolase family protein rbh
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
Displaying 5 items

View Taxonomy