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SCNpilot_cont_1000_bf_scaffold_3143

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_3143_1
unknown

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comp(1..105)
DNA (105bp) protein (35aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_3143_2
Bacteriovorax sp. BSW11_IV, Bacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(102..1145)
DNA (1044bp) protein (348aa)
Cupin domain protein n=1 Tax=Bacteriovorax sp. BSW11_IV RepID=T0T4T3_9DELT
Cupin domain protein {ECO:0000313|EMBL:EQC50217.1}; TaxID=1353529 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bacteriovoracaceae; Bacteriovorax.;" source="Bacteriovorax sp. BSW11_IV.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_3143_3
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1142..2167)
DNA (1026bp) protein (342aa)
RluA family pseudouridine synthase; K06179 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] rbh
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
Pseudouridine synthase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HWU2_PARL1 rbh
SCNpilot_cont_1000_bf_scaffold_3143_4
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

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2311..2709
DNA (399bp) protein (133aa)
Putative fluoride ion transporter CrcB n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=CRCB_OPITP
camphor resistance protein CrcB; K06199 CrcB protein
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
SCNpilot_cont_1000_bf_scaffold_3143_5
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2712..3053
DNA (342bp) protein (114aa)
Bll2637 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89RX5_BRADU
hypothetical protein; K09137 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGJ68123.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
SCNpilot_cont_1000_bf_scaffold_3143_6
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3211..4554
DNA (1344bp) protein (448aa)
glutamate dehydrogenase (EC:1.4.1.4); K00262 glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
glutamate dehydrogenase n=1 Tax=Afipia birgiae RepID=UPI0002DE7498
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
SCNpilot_cont_1000_bf_scaffold_3143_7
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4580..5893)
DNA (1314bp) protein (438aa)
AAA ATPase central domain protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HWU0_PARL1 rbh
recombination factor protein RarA; K07478 putative ATPase rbh
AAA ATPase central domain protein {ECO:0000313|EMBL:ABS64373.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_1000_bf_scaffold_3143_8
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6016..6603)
DNA (588bp) protein (196aa)
Peptidase S1C, Do n=2 Tax=Rhodospirillum rubrum RepID=G2T6P0_RHORU
peptidase S1C, Do
Peptidase S1C, Do {ECO:0000313|EMBL:ABC23459.1}; Flags: Precursor;; TaxID=269796 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;"
Displaying 8 items

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