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SCNpilot_cont_1000_bf_scaffold_6

Search features with annotation key words

Displaying items 1-30 of 331 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_6_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1..612
DNA (612bp) protein (204aa)
Transcriptional regulator, MarR family {ECO:0000313|EMBL:AEW03471.1}; EC=2.7.1.2 {ECO:0000313|EMBL:AEW03471.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Transcriptional regulator, MarR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBH1_NIAKG
MarR family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_6_2
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

666..4016
DNA (3351bp) protein (1117aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00035E3DC9 rbh
TonB-dependent receptor {ECO:0000313|EMBL:KIC95736.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
TonB-linked outer membrane protein, SusC/RagA family
SCNpilot_cont_1000_bf_scaffold_6_3
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4043..5677
DNA (1635bp) protein (545aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036AFF8B
Uncharacterized protein {ECO:0000313|EMBL:ETZ23886.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_6_4
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5764..6282
DNA (519bp) protein (173aa)
Antioxidant, AhpC/TSA family n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FZM0_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KIC95654.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
alkyl hydroperoxide reductase
SCNpilot_cont_1000_bf_scaffold_6_5
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6285..7595
DNA (1311bp) protein (437aa)
Calcium-binding EF-hand-containing protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PB20_CHIPD rbh
Calcium-binding protein {ECO:0000313|EMBL:KIC95655.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
calcium-binding EF-hand-containing protein rbh
SCNpilot_cont_1000_bf_scaffold_6_6
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7573..10983
DNA (3411bp) protein (1137aa)
ASPIC/UnbV domain protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GDQ3_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:ETZ23889.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
rhs family protein
SCNpilot_cont_1000_bf_scaffold_6_7
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10980..12272
DNA (1293bp) protein (431aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003712FFC rbh
Phosphatidic acid phosphatase {ECO:0000313|EMBL:KIC95738.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
phosphoesterase pa-phosphatase related protein
SCNpilot_cont_1000_bf_scaffold_6_8
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12333..14333
DNA (2001bp) protein (667aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036F32D7 rbh
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
Low affinity potassium transport system protein kup; K03549 KUP system potassium uptake protein
SCNpilot_cont_1000_bf_scaffold_6_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14473..15699
DNA (1227bp) protein (409aa)
Transcriptional regulator, MarR family {ECO:0000313|EMBL:AEW03471.1}; EC=2.7.1.2 {ECO:0000313|EMBL:AEW03471.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Transcriptional regulator, MarR family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBH1_NIAKG rbh
MarR family transcriptional regulator rbh
SCNpilot_cont_1000_bf_scaffold_6_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15692..16594)
DNA (903bp) protein (301aa)
Polysaccharide deacetylase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGZ9_NIAKG rbh
polysaccharide deacetylase rbh
Polysaccharide deacetylase {ECO:0000313|EMBL:AEW00610.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_bf_scaffold_6_11
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16646..17131)
DNA (486bp) protein (162aa)
Putative GAF sensor protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YAU8_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:GAO42939.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
GAF domain-containing protein; K07170 GAF domain-containing protein
SCNpilot_cont_1000_bf_scaffold_6_12
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17196..18269
DNA (1074bp) protein (358aa)
Rieske (2Fe-2S) iron-sulfur domain protein n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BCR4_MEISD rbh
Choline monooxygenase {ECO:0000313|EMBL:KIC94696.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
Rieske (2Fe-2S) domain-containing protein rbh
SCNpilot_cont_1000_bf_scaffold_6_13
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

18280..19581
DNA (1302bp) protein (434aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI00036D2C3D rbh
Amidohydrolase {ECO:0000313|EMBL:AKD05890.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
amidohydrolase rbh
SCNpilot_cont_1000_bf_scaffold_6_14
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19578..20084)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PG94_CHIPD
hypothetical protein; K09705 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU59826.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_bf_scaffold_6_15
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20095..20970)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGH2_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC90161.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_6_16
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21192..21509
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGH3_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO44338.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_6_17
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21833..23230
DNA (1398bp) protein (466aa)
L-serine dehydratase 1; K01752 L-serine dehydratase [EC:4.3.1.17] rbh
L-serine dehydratase 1 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGH6_NIAKG rbh
L-serine dehydratase 1 {ECO:0000313|EMBL:AEV97399.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_bf_scaffold_6_18
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23590..23817)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THN4_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97462.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_bf_scaffold_6_19
unknown

Not on your lists

23867..24412
DNA (546bp) protein (182aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_6_20
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

24539..26920
DNA (2382bp) protein (794aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EAL4_RUNSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI48385.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
SCNpilot_cont_1000_bf_scaffold_6_21
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26965..28137)
DNA (1173bp) protein (391aa)
Aminodeoxyfutalosine synthase {ECO:0000256|HAMAP-Rule:MF_00993}; Short=AFL synthase {ECO:0000256|HAMAP-Rule:MF_00993};; Short=Aminofutalosine synthase {ECO:0000256|HAMAP-Rule:MF_00993};; EC=2.5.1.120 {ECO:0000256|HAMAP-Rule:MF_00993};; Menaquinone biosynthetic enzyme MqnE {ECO:0000256|HAMAP-Rule:MF_00993}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Putative menaquinone biosynthesis protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGH7_NIAKG rbh
putative menaquinone biosynthesis protein rbh
SCNpilot_cont_1000_bf_scaffold_6_22
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28200..29441
DNA (1242bp) protein (414aa)
Nucleoside transporter n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGH8_NIAKG rbh
nucleoside transporter; K11537 MFS transporter, NHS family, xanthosine permease rbh
Nucleoside transporter {ECO:0000313|EMBL:AEV97401.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_bf_scaffold_6_23
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

29600..31936
DNA (2337bp) protein (779aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI0003723E23
Uncharacterized protein {ECO:0000313|EMBL:AKD57628.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_6_24
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31974..33029)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF59_NIAKG rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEW02679.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_bf_scaffold_6_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33048..35114)
DNA (2067bp) protein (689aa)
C-terminal processing peptidase; K03797 carboxyl-terminal processing protease [EC:3.4.21.102] rbh
C-terminal processing peptidase {ECO:0000313|EMBL:AEW02678.1}; EC=3.4.21.102 {ECO:0000313|EMBL:AEW02678.1};; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
C-terminal processing peptidase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF58_NIAKG rbh
SCNpilot_cont_1000_bf_scaffold_6_26
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35175..35492)
DNA (318bp) protein (106aa)
Thioredoxin n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGH9_NIAKG
thioredoxin; K03671 thioredoxin 1
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_bf_scaffold_6_27
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35656..39291)
DNA (3636bp) protein (1212aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
DNA polymerase III subunit alpha; K02337 DNA polymerase III subunit alpha [EC:2.7.7.7] rbh
DNA polymerase III, alpha subunit n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGI0_NIAKG rbh
SCNpilot_cont_1000_bf_scaffold_6_28
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

39503..40177
DNA (675bp) protein (225aa)
NLP/P60 protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NJS6_9SPHI
Murein DD-endopeptidase {ECO:0000313|EMBL:GAO44346.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
NLP/P60 protein
SCNpilot_cont_1000_bf_scaffold_6_29
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(40184..41839)
DNA (1656bp) protein (552aa)
Peptidase M1 membrane alanine aminopeptidase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGI5_NIAKG rbh
Peptidase M1 membrane alanine aminopeptidase rbh
Peptidase M1 membrane alanine aminopeptidase {ECO:0000313|EMBL:AEV97408.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_bf_scaffold_6_30
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

41876..43552
DNA (1677bp) protein (559aa)
ABC transporter substrate-binding protein n=1 Tax=Niabella aurantiaca RepID=UPI00037BC2CA rbh
ABC transporter periplasmic protein rbh
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:AEV97409.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying items 1-30 of 331 in total

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