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SCNpilot_cont_1000_bf_scaffold_29

Search features with annotation key words

Displaying items 1-30 of 637 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_29_1
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(100..804)
DNA (705bp) protein (235aa)
Glycerol uptake facilitator protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DV98_9PROT rbh
Glycerol uptake facilitator protein {ECO:0000313|EMBL:CCU63240.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
major intrinsic protein; K02440 glycerol uptake facilitator protein rbh
SCNpilot_cont_1000_bf_scaffold_29_2
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(836..2413)
DNA (1578bp) protein (526aa)
FAD dependent oxidoreductase; K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] rbh
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI00036EDA52 rbh
FAD-dependent oxidoreductase {ECO:0000313|EMBL:KIC89181.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
SCNpilot_cont_1000_bf_scaffold_29_3
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2497..4002)
DNA (1506bp) protein (502aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
glpK; glycerol kinase (EC:2.7.1.30); K00864 glycerol kinase [EC:2.7.1.30]
Glycerol kinase n=1 Tax=Pseudogulbenkiania ferrooxidans EGD-HP2 RepID=U1AV77_9NEIS
SCNpilot_cont_1000_bf_scaffold_29_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4134..5078
DNA (945bp) protein (315aa)
GCN5-related N-acetyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQS4_NIAKG rbh
N-acetyltransferase GCN5 rbh
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AEV96808.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_bf_scaffold_29_5
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5083..6117)
DNA (1035bp) protein (345aa)
pgl; gluconolactonase (EC:3.1.1.17); K01053 gluconolactonase [EC:3.1.1.17] rbh
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00036635F9 rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC94979.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
SCNpilot_cont_1000_bf_scaffold_29_6
unknown

Not on your lists

6179..6691
DNA (513bp) protein (171aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_29_7
unknown

Not on your lists

comp(6641..6775)
DNA (135bp) protein (45aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_29_8
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(6736..11130)
DNA (4395bp) protein (1465aa)
PKD domain containing protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8K1M5_9BACT rbh
PKD domain containing protein {ECO:0000313|EMBL:ELR73352.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
PKD domain-containing protein rbh
SCNpilot_cont_1000_bf_scaffold_29_9
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11442..13733
DNA (2292bp) protein (764aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003625E9F rbh
Uncharacterized protein {ECO:0000313|EMBL:ETZ23737.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein rbh
SCNpilot_cont_1000_bf_scaffold_29_10
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13745..14572
DNA (828bp) protein (276aa)
Glycoside hydrolase family 16 n=1 Tax=Niabella soli DSM 19437 RepID=H1NTD1_9SPHI rbh
Beta-glucanase {ECO:0000313|EMBL:AHF15613.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
putative endo-beta-galactosidase rbh
SCNpilot_cont_1000_bf_scaffold_29_11
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14652..15329
DNA (678bp) protein (226aa)
membrane protein n=1 Tax=Pedobacter agri RepID=UPI00029AB529
Membrane protein {ECO:0000313|EMBL:KIA90302.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_29_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15326..15631
DNA (306bp) protein (102aa)
Transcriptional regulator n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL55_NIAKG
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AEW01896.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_bf_scaffold_29_13
unknown

Not on your lists

15753..16133
DNA (381bp) protein (127aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_29_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16165..16554
DNA (390bp) protein (130aa)
diacylglycerol kinase; K00901 diacylglycerol kinase [EC:2.7.1.107]
Diacylglycerol kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL50_NIAKG
Diacylglycerol kinase {ECO:0000313|EMBL:AEW01891.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_bf_scaffold_29_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16551..17318
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL49_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01890.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_bf_scaffold_29_16
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17416..18726
DNA (1311bp) protein (437aa)
hypothetical protein MsalJ2_18228 id=3012454 bin=GWF2_Ignavibacteria_33_9 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria rbh
Inner membrane CreD family protein; K06143 inner membrane protein rbh
Tax=BJP_08E140C01_Bacteriodales_41_10
SCNpilot_cont_1000_bf_scaffold_29_17
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

18733..20100
DNA (1368bp) protein (456aa)
Uncharacterized methyltransferase slr0309 n=7 Tax=Bacteria RepID=Y309_SYNY3 rbh
slr0309; P-methylase rbh
Tax=RBG_16_Chloroflexi_57_11_curated
SCNpilot_cont_1000_bf_scaffold_29_18
unknown

Not on your lists

20093..20731
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI0003646E71
SCNpilot_cont_1000_bf_scaffold_29_19
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20924..21646
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6V0_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO43047.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_29_20
Flavobacterium sp. F52, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21648..22040)
DNA (393bp) protein (131aa)
DoxX family protein n=1 Tax=Flavobacterium sp. F52 RepID=J1ACR3_9FLAO
DoxX family protein
DoxX family protein {ECO:0000313|EMBL:EJF99863.1}; TaxID=1202532 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. F52.;"
SCNpilot_cont_1000_bf_scaffold_29_21
Flavobacterium sp. F52, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22127..22960
DNA (834bp) protein (278aa)
AraC family transcriptional regulator n=1 Tax=Flavobacterium sp. F52 RepID=J0RVT2_9FLAO rbh
AraC family transcriptional regulator {ECO:0000313|EMBL:EJF99864.1}; TaxID=1202532 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. F52.;"
AraC family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_29_22
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23042..23953)
DNA (912bp) protein (304aa)
Beta-lactamase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YAN3_9SPHI rbh
Beta-lactamase {ECO:0000313|EMBL:EHQ29153.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
beta-lactamase rbh
SCNpilot_cont_1000_bf_scaffold_29_23
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24013..26406
DNA (2394bp) protein (798aa)
ABC-type antimicrobial peptide transport system, permease component n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KSU7_SOLCM
antimicrobial peptide ABC transporter permease
ABC-type antimicrobial peptide transport system, permease component {ECO:0000313|EMBL:AFD05407.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_cont_1000_bf_scaffold_29_24
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26408..29986)
DNA (3579bp) protein (1193aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL48_NIAKG rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEW01889.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_bf_scaffold_29_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

30062..30703
DNA (642bp) protein (214aa)
Beta-lactamase domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL47_NIAKG rbh
beta-lactamase rbh
Beta-lactamase domain protein {ECO:0000313|EMBL:AEW01888.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_bf_scaffold_29_26
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30712..32175)
DNA (1464bp) protein (488aa)
Polysaccharide biosynthesis protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL46_NIAKG rbh
polysaccharide biosynthesis protein rbh
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:AEW01887.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_bf_scaffold_29_27
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

32383..33225
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL45_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:AEW01886.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_bf_scaffold_29_28
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33242..33940)
DNA (699bp) protein (233aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMV2_CHIPD rbh
LuxR family transcriptional regulator rbh
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACU60386.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_bf_scaffold_29_29
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33958..34698)
DNA (741bp) protein (247aa)
Histidine kinase {ECO:0000313|EMBL:ACU60387.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ACU60387.1};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Histidine kinase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMV3_CHIPD
histidine kinase
SCNpilot_cont_1000_bf_scaffold_29_30
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34739..35419)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PMV4_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU60388.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Displaying items 1-30 of 637 in total

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