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SCNpilot_cont_1000_bf_scaffold_41

Search features with annotation key words

Displaying items 1-30 of 381 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_41_1
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(89..4006)
DNA (3918bp) protein (1306aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00036307CE
Uncharacterized protein {ECO:0000313|EMBL:KIC92934.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
SCNpilot_cont_1000_bf_scaffold_41_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4157..5206)
DNA (1050bp) protein (350aa)
agmatine deiminase; K10536 agmatine deiminase [EC:3.5.3.12] rbh
Agmatine deiminase {ECO:0000313|EMBL:AEW00640.1}; EC=3.5.3.12 {ECO:0000313|EMBL:AEW00640.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Agmatine deiminase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH29_NIAKG rbh
SCNpilot_cont_1000_bf_scaffold_41_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5209..6084)
DNA (876bp) protein (292aa)
N-carbamoylputrescine amidase; K12251 N-carbamoylputrescine amidase [EC:3.5.1.53] rbh
N-carbamoylputrescine amidase {ECO:0000313|EMBL:AEW00641.1}; EC=3.5.1.53 {ECO:0000313|EMBL:AEW00641.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
N-carbamoylputrescine amidase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH30_NIAKG rbh
SCNpilot_cont_1000_bf_scaffold_41_4
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6113..7180)
DNA (1068bp) protein (356aa)
fatty acid desaturase n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B2E258 rbh
Fatty acid desaturase {ECO:0000313|EMBL:KIC94278.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
fatty acid desaturase rbh
SCNpilot_cont_1000_bf_scaffold_41_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7279..8016)
DNA (738bp) protein (246aa)
LmbE family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH31_NIAKG rbh
LmbE family protein rbh
LmbE family protein {ECO:0000313|EMBL:AEW00642.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_bf_scaffold_41_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8153..9556
DNA (1404bp) protein (468aa)
dihydrolipoamide dehydrogenase; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] rbh
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
dihydrolipoyl dehydrogenase n=1 Tax=Niabella aurantiaca RepID=UPI00036E42F8 rbh
SCNpilot_cont_1000_bf_scaffold_41_7
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9621..10157
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003707D61
Uncharacterized protein {ECO:0000313|EMBL:KIC95808.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
DinB family protein
SCNpilot_cont_1000_bf_scaffold_41_8
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10149..11273)
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003668380 rbh
Bile acid:sodium symporter {ECO:0000313|EMBL:EHQ24354.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
bile acid:sodium symporter; K03453 bile acid:Na+ symporter, BASS family rbh
SCNpilot_cont_1000_bf_scaffold_41_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11284..12210)
DNA (927bp) protein (309aa)
Demethylmenaquinone methyltransferase-like protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9I2_NIAKG rbh
demethylmenaquinone methyltransferase-like protein rbh
Demethylmenaquinone methyltransferase-like protein {ECO:0000313|EMBL:AEV99172.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_bf_scaffold_41_10
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12374..13225
DNA (852bp) protein (284aa)
methylated-DNA--protein-cysteine methyltransferase; K10778 AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] rbh
Methylated-DNA/protein-cysteine methyltransferase n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y1G7_PEDHD rbh
Methylated-DNA/protein-cysteine methyltransferase {ECO:0000313|EMBL:ACU02943.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_cont_1000_bf_scaffold_41_11
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13194..14159)
DNA (966bp) protein (322aa)
HhH-GPD family protein; K01247 DNA-3-methyladenine glycosylase II [EC:3.2.2.21] rbh
HhH-GPD family protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W476_DYAFD rbh
HhH-GPD family protein {ECO:0000313|EMBL:ACT92313.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
SCNpilot_cont_1000_bf_scaffold_41_12
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14375..16813
DNA (2439bp) protein (813aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L3D2_HALH1 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEE51766.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
SCNpilot_cont_1000_bf_scaffold_41_13
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

comp(16819..17370)
DNA (552bp) protein (184aa)
KilA-N, DNA-binding domain n=1 Tax=Niabella soli DSM 19437 RepID=H1NTI1_9SPHI
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
SCNpilot_cont_1000_bf_scaffold_41_14
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17561..18148
DNA (588bp) protein (196aa)
RNA polymerase sigma-70 factor, Bacteroides expansion family 1 n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KR60_SOLCM
Contig58, whole genome shotgun sequence {ECO:0000313|EMBL:KIO76639.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
RNA polymerase sigma-70 factor, Bacteroides expansion family 1
SCNpilot_cont_1000_bf_scaffold_41_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18145..19218
DNA (1074bp) protein (358aa)
Anti-FecI sigma factor, FecR n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL15_NIAKG
anti-FecI sigma factor FecR
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:AEW00854.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_bf_scaffold_41_16
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19228..21015
DNA (1788bp) protein (596aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XW59_PEDHD rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO43433.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein rbh
SCNpilot_cont_1000_bf_scaffold_41_17
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21078..23462
DNA (2385bp) protein (795aa)
TonB-dependent receptor plug n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EN84_RUNSL rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC93597.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
TonB-dependent receptor plug rbh
SCNpilot_cont_1000_bf_scaffold_41_18
Chloroflexus aurantiacus, Chloroflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(23489..24268)
DNA (780bp) protein (260aa)
N-acetyltransferase n=2 Tax=Chloroflexus RepID=A9WHF1_CHLAA
N-acetyltransferase
N-acetyltransferase {ECO:0000313|EMBL:ABY35663.1}; TaxID=324602 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Chloroflexaceae; Chloroflexus.;" source="Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl).;"
SCNpilot_cont_1000_bf_scaffold_41_19
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24569..25333
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BVM0_9BACT
putative ABC-type molybdate transport system, periplasmic component modA
Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
SCNpilot_cont_1000_bf_scaffold_41_20
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25346..25984
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00037E4CEC
Uncharacterized protein {ECO:0000313|EMBL:KFC60593.1}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
molybdate ABC transporter permease; K02018 molybdate transport system permease protein
SCNpilot_cont_1000_bf_scaffold_41_21
BJP_08E140C01_Flavobacteriales_35_8, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25989..26678
DNA (690bp) protein (230aa)
spermidine/putrescine ABC transporter ATP-binding protein (EC:3.6.3.31); K02017 molybdate transport system ATP-binding protein [EC:3.6.3.29]
Uncharacterized protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5C3R1_9BACT
Tax=BJP_08E140C01_Flavobacteriales_35_8
SCNpilot_cont_1000_bf_scaffold_41_22
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26687..27862
DNA (1176bp) protein (392aa)
FAD dependent oxidoreductase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH35_NIAKG rbh
FAD dependent oxidoreductase rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:AEW00646.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_bf_scaffold_41_23
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27813..30920)
DNA (3108bp) protein (1036aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B5C273 rbh
Uncharacterized protein {ECO:0000313|EMBL:KIC94616.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
alpha-1,2-mannosidase
SCNpilot_cont_1000_bf_scaffold_41_24
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30917..35974)
DNA (5058bp) protein (1686aa)
Alpha-N-acetylglucosaminidase {ECO:0000313|EMBL:ACU60593.1}; EC=3.2.1.50 {ECO:0000313|EMBL:ACU60593.1};; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
alpha-N-acetylglucosaminidase; K01205 alpha-N-acetylglucosaminidase [EC:3.2.1.50] rbh
Alpha-N-acetylglucosaminidase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) PF7_CHIPD">RepID=C7PPF7_CHIPD rbh
SCNpilot_cont_1000_bf_scaffold_41_25
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(36032..37600)
DNA (1569bp) protein (523aa)
carbohydrate-binding protein SusD n=1 Tax=Cytophagales str. B6 RepID=UPI0003B5FEFA rbh
RagB/SusD domain-containing protein rbh
RagB/SusD domain protein {ECO:0000313|EMBL:ACU60592.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_bf_scaffold_41_26
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(37619..41149)
DNA (3531bp) protein (1177aa)
TonB-dependent receptor plug n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) PF5_CHIPD">RepID=C7PPF5_CHIPD rbh
TonB-dependent receptor plug {ECO:0000313|EMBL:ACU60591.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
TonB-dependent receptor plug rbh
SCNpilot_cont_1000_bf_scaffold_41_27
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(41292..42479)
DNA (1188bp) protein (396aa)
anti-sigma factor n=1 Tax=Cytophagales str. B6 RepID=UPI0003B6A52D
Putative anti-sigma factor {ECO:0000313|EMBL:GAO42724.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
anti-FecI sigma factor FecR
SCNpilot_cont_1000_bf_scaffold_41_28
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(42553..43131)
DNA (579bp) protein (193aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1XZ24_9SPHI
Putative RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:GAO42723.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
ECF subfamily RNA polymerase sigma-24 subunit
SCNpilot_cont_1000_bf_scaffold_41_29
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

43279..46500
DNA (3222bp) protein (1074aa)
Rhs family protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BGT8_ZUNPS rbh
Uncharacterized protein {ECO:0000313|EMBL:ETZ23889.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
rhs family protein rbh
SCNpilot_cont_1000_bf_scaffold_41_30
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(46512..47789)
DNA (1278bp) protein (426aa)
Pregnancy-associated plasma protein-A n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B54684 rbh
Uncharacterized protein {ECO:0000313|EMBL:AHJ99385.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
hypothetical protein
Displaying items 1-30 of 381 in total

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