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SCNpilot_cont_1000_bf_scaffold_236

Search features with annotation key words

Displaying items 1-30 of 262 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_236_1
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

449..1465
DNA (1017bp) protein (339aa)
AraC family transcriptional regulator n=1 Tax=Pontibacter sp. BAB1700 RepID=J0LPI1_9BACT
AraC family transcriptional regulator {ECO:0000313|EMBL:EJF11403.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
AraC family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_236_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1462..2493
DNA (1032bp) protein (344aa)
Transcriptional regulator, AraC family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9Q7_NIAKG
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AEW00250.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_bf_scaffold_236_3
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2808..3308
DNA (501bp) protein (167aa)
UDP-galactopyranose mutase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PAU1_CHIPD
Uncharacterized protein {ECO:0000313|EMBL:KIC94997.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_236_4
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3308..3682
DNA (375bp) protein (125aa)
Transcriptional regulator, AraC family n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JSI7_9BACT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ELR71168.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
AraC family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_236_5
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3690..6491)
DNA (2802bp) protein (934aa)
alpha-L-rhamnosidase; K05989 alpha-L-rhamnosidase [EC:3.2.1.40]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003635D52
Alpha-L-rhamnosidase {ECO:0000313|EMBL:ACU61645.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_bf_scaffold_236_6
unknown

Not on your lists

6555..6860
DNA (306bp) protein (102aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_236_7
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7161..9554
DNA (2394bp) protein (798aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B3E66E
Uncharacterized protein {ECO:0000313|EMBL:ETZ23354.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_236_8
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9656..11239
DNA (1584bp) protein (528aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7P9W6_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU57541.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_bf_scaffold_236_9
Bacillus gaemokensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11255..13921
DNA (2667bp) protein (889aa)
hypothetical protein n=1 Tax=cyanobacterium PCC 7702 RepID=UPI00036257D8 rbh
Uncharacterized protein {ECO:0000313|EMBL:KEK23358.1}; TaxID=574375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus gaemokensis.;"
serine/threonine protein kinase rbh
SCNpilot_cont_1000_bf_scaffold_236_10
unknown

Not on your lists

14044..14334
DNA (291bp) protein (97aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_236_11
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14392..15801)
DNA (1410bp) protein (470aa)
RagB/SusD domain-containing protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1XZ27_9SPHI rbh
RagB/SusD domain-containing protein {ECO:0000313|EMBL:EHQ24612.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
RagB/SusD domain-containing protein rbh
SCNpilot_cont_1000_bf_scaffold_236_12
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15814..19176)
DNA (3363bp) protein (1121aa)
TonB-dependent receptor plug n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1XZ26_9SPHI rbh
TonB-dependent receptor plug {ECO:0000313|EMBL:EHQ24611.1}; Flags: Precursor;; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
TonB-linked outer membrane protein, SusC/RagA family rbh
SCNpilot_cont_1000_bf_scaffold_236_13
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19607..20821)
DNA (1215bp) protein (405aa)
Anti-FecI sigma factor, FecR n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T720_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC94053.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
anti-FecI sigma factor FecR
SCNpilot_cont_1000_bf_scaffold_236_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20986..21570)
DNA (585bp) protein (195aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T722_NIAKG
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEV99043.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_bf_scaffold_236_15
unknown

Not on your lists

comp(21997..22266)
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_236_16
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22480..23331)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEA6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL97797.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_236_17
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23527..23775
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI000364436E
Uncharacterized protein {ECO:0000313|EMBL:KIA96365.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
lambda repressor-like DNA-binding protein
SCNpilot_cont_1000_bf_scaffold_236_18
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23815..25044)
DNA (1230bp) protein (410aa)
Aminotransferase class-III n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PFU0_CHIPD rbh
class III aminotransferase rbh
Aminotransferase class-III {ECO:0000313|EMBL:ACU57923.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_1000_bf_scaffold_236_19
unknown

Not on your lists

comp(25057..25323)
DNA (267bp) protein (89aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_236_20
unknown

Not on your lists

comp(25339..25725)
DNA (387bp) protein (129aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_236_21
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25836..26057
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL62_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01903.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_bf_scaffold_236_22
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26126..26461
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL63_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01904.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_bf_scaffold_236_23
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26554..27708
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000374B902 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADY54179.1}; Flags: Precursor;; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
SCNpilot_cont_1000_bf_scaffold_236_24
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27702..28646)
DNA (945bp) protein (315aa)
ribosome biogenesis GTPase RsgA; K06949 ribosome biogenesis GTPase [EC:3.6.1.-] rbh
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL64_NIAKG rbh
SCNpilot_cont_1000_bf_scaffold_236_25
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28643..29647)
DNA (1005bp) protein (335aa)
von Willebrand factor type A n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL65_NIAKG rbh
von Willebrand factor type A; K07114 uncharacterized protein rbh
von Willebrand factor type A {ECO:0000313|EMBL:AEW01906.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_bf_scaffold_236_26
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29647..30663)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL66_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01907.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_bf_scaffold_236_27
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30667..31590)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL67_NIAKG rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEW01908.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_bf_scaffold_236_28
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31625..32626)
DNA (1002bp) protein (334aa)
ATPase; K03924 MoxR-like ATPase [EC:3.6.3.-] rbh
ATPase associated with various cellular activities AAA_3 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL68_NIAKG rbh
ATPase associated with various cellular activities AAA_3 {ECO:0000313|EMBL:AEW01909.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_bf_scaffold_236_29
unknown

Not on your lists

32813..33259
DNA (447bp) protein (149aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_236_30
unknown

Not on your lists

33449..33889
DNA (441bp) protein (147aa)

This feature has no annotations

Displaying items 1-30 of 262 in total

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