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SCNpilot_cont_1000_bf_scaffold_321

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_321_1
unknown

Not on your lists

2..121
DNA (120bp) protein (40aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_321_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

121..1218
DNA (1098bp) protein (366aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037D5CED
sodium solute transporter superfamily protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCNpilot_cont_1000_bf_scaffold_321_3
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1215..2420
DNA (1206bp) protein (402aa)
MFS transporter n=1 Tax=Pedobacter arcticus RepID=UPI00030BABA8 rbh
MFS transporter {ECO:0000313|EMBL:KIA92401.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
major facilitator superfamily protein rbh
SCNpilot_cont_1000_bf_scaffold_321_4
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2413..3600
DNA (1188bp) protein (396aa)
N-acylglucosamine 2-epimerase (EC:5.1.3.8); K01787 N-acylglucosamine 2-epimerase [EC:5.1.3.8] rbh
N-acylglucosamine 2-epimerase {ECO:0000313|EMBL:ACU05446.1}; EC=5.1.3.8 {ECO:0000313|EMBL:ACU05446.1};; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
N-acylglucosamine 2-epimerase n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y403_PEDHD rbh
SCNpilot_cont_1000_bf_scaffold_321_5
Maribacter sp. HTCC2170, Maribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3597..5033
DNA (1437bp) protein (479aa)
sialate O-acetylesterase; K05970 sialate O-acetylesterase [EC:3.1.1.53] rbh
Sialate O-acetylesterase n=1 Tax=Maribacter sp. (strain HTCC2170 / KCCM 42371) RepID=A4AN28_MARSH rbh
Sialate O-acetylesterase {ECO:0000313|EMBL:EAR02400.1}; TaxID=313603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Maribacter.;" source="Maribacter sp. (strain HTCC2170 / KCCM 42371).;"
SCNpilot_cont_1000_bf_scaffold_321_6
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5051..6163
DNA (1113bp) protein (371aa)
Exo-alpha-sialidase; K01186 sialidase-1 [EC:3.2.1.18] rbh
exo-alpha-sialidase n=1 Tax=Dyadobacter beijingensis RepID=UPI000367ECAF rbh
Exo-alpha-sialidase {ECO:0000313|EMBL:KIC91875.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
SCNpilot_cont_1000_bf_scaffold_321_7
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6167..7711
DNA (1545bp) protein (515aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y9T3_9SPHI rbh
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:EHQ31116.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
EmrB/QacA subfamily drug resistance transporter rbh
SCNpilot_cont_1000_bf_scaffold_321_8
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8039..8800)
DNA (762bp) protein (254aa)
Two component transcriptional regulator, LytTR family id=3853762 bin=GWF2_Bacteroidetes_38_335 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
LytTR family two component transcriptional regulator
Tax=GWF2_Bacteroidetes_38_335_curated
SCNpilot_cont_1000_bf_scaffold_321_9
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8781..9794)
DNA (1014bp) protein (338aa)
Signal transduction histidine kinase, LytS id=2995428 bin=GWF2_Bacteroidetes_35_48 species=Leadbetterella byssophila genus=Leadbetterella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
signal transduction histidine kinase, lyts
Tax=GWF2_Bacteroidetes_35_48_curated
SCNpilot_cont_1000_bf_scaffold_321_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9842..10798
DNA (957bp) protein (319aa)
Transcriptional regulator, AraC family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNC8_NIAKG rbh
AraC family transcriptional regulator rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AEV98830.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_bf_scaffold_321_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10862..11587
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TNC9_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98831.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_bf_scaffold_321_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11598..12353
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THN9_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97467.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_bf_scaffold_321_13
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12459..13295)
DNA (837bp) protein (279aa)
class IV aminotransferase; K00824 D-alanine transaminase [EC:2.6.1.21]
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037E5261
Uncharacterized protein {ECO:0000313|EMBL:KIC89985.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
SCNpilot_cont_1000_bf_scaffold_321_14
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13292..14434)
DNA (1143bp) protein (381aa)
peptidase S58 DmpA; K01266 D-aminopeptidase [EC:3.4.11.19] rbh
Peptidase S58 DmpA n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XWV7_PEDHD rbh
Peptidase S58 DmpA {ECO:0000313|EMBL:ACU04251.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
SCNpilot_cont_1000_bf_scaffold_321_15
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14479..15480)
DNA (1002bp) protein (334aa)
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12); K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12] rbh
glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Spirosoma panaciterrae RepID=UPI0003681C7E rbh
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000313|EMBL:AKD56246.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
SCNpilot_cont_1000_bf_scaffold_321_16
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15521..17944)
DNA (2424bp) protein (808aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00037D3E38 rbh
ABC transporter permease {ECO:0000313|EMBL:KJF44096.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
ABC transporter permease; K02004 putative ABC transport system permease protein rbh
SCNpilot_cont_1000_bf_scaffold_321_17
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18002..20221
DNA (2220bp) protein (740aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01VL7_SOLUE rbh
Uncharacterized protein {ECO:0000313|EMBL:ETZ20683.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein rbh
SCNpilot_cont_1000_bf_scaffold_321_18
Kordia algicida, Kordia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20208..21320)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Kordia algicida OT-1 RepID=A9DYA5_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EDP96106.1}; TaxID=391587 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Kordia.;" source="Kordia algicida OT-1.;"
SCNpilot_cont_1000_bf_scaffold_321_19
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

21400..22326
DNA (927bp) protein (309aa)
Beta-lactamase class A n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0G2B4_ECHVK rbh
beta-lactamase class A rbh
Beta-lactamase class A {ECO:0000313|EMBL:AGA79116.1}; Flags: Precursor;; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221).;"
SCNpilot_cont_1000_bf_scaffold_321_20
unknown

Not on your lists

22287..22424
DNA (138bp) protein (46aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_321_21
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22428..23414
DNA (987bp) protein (329aa)
Redoxin domain protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C4L6_SPHS2
redoxin
Redoxin domain protein {ECO:0000313|EMBL:ADZ81010.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCNpilot_cont_1000_bf_scaffold_321_22
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

23489..24052
DNA (564bp) protein (188aa)
Peroxidase family protein n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F0U1_ACIC5
peroxidase family protein
Peroxidase family protein {ECO:0000313|EMBL:ACO32283.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
SCNpilot_cont_1000_bf_scaffold_321_23
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24059..24610
DNA (552bp) protein (184aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Alkylhydroperoxidase like protein, AhpD family n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T890_NIAKG rbh
alkylhydroperoxidase rbh
SCNpilot_cont_1000_bf_scaffold_321_24
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

24747..25124
DNA (378bp) protein (126aa)
Transcriptional regulator, AraC family n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JNS3_9BACT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ELR70495.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
AraC family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_321_25
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

25310..26209
DNA (900bp) protein (300aa)
ribokinase; K00852 ribokinase [EC:2.7.1.15]
Ribokinase {ECO:0000313|EMBL:AHM63165.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
Ribokinase id=2717660 bin=GWF2_Bacteroidetes_40_13 species=Leadbetterella byssophila genus=Leadbetterella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes rbh
SCNpilot_cont_1000_bf_scaffold_321_26
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

26224..27219
DNA (996bp) protein (332aa)
Putative integral membrane protein, putative sugar permease n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EQJ0_EMTOG rbh
putative integral membrane protein, putative sugar permease rbh
Putative integral membrane protein, putative sugar permease {ECO:0000313|EMBL:AFK01943.1}; Flags: Precursor;; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
SCNpilot_cont_1000_bf_scaffold_321_27
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27253..28002
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRA7_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00029.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_bf_scaffold_321_28
unknown

Not on your lists

comp(27975..28730)
DNA (756bp) protein (252aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_321_29
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29042..29374
DNA (333bp) protein (111aa)
ATP-binding region ATPase domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TG93_NIAKG
ATP-binding region ATPase domain-containing protein
ATP-binding region ATPase domain protein {ECO:0000313|EMBL:AEW02732.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_1000_bf_scaffold_321_30
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

29374..30009
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TR68_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV98982.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Displaying items 1-30 of 57 in total

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