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SCNpilot_cont_1000_bf_scaffold_454

Search features with annotation key words

Displaying items 1-30 of 160 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_454_1
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..112)
DNA (111bp) protein (37aa)
tktA; transketolase; K00615 transketolase [EC:2.2.1.1]
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
transketolase n=1 Tax=Microbacterium yannicii RepID=UPI000371F1A4
SCNpilot_cont_1000_bf_scaffold_454_2
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

229..966
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002F4A721 rbh
HTH-type transcriptional regulator LutR {ECO:0000313|EMBL:KJL44614.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
transcriptional regulator; K05799 GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
SCNpilot_cont_1000_bf_scaffold_454_3
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1143..2519
DNA (1377bp) protein (459aa)
Permease of the major facilitator superfamily n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NDC3_MICTS rbh
Putative tartrate transporter {ECO:0000313|EMBL:KJL44615.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
permease of the major facilitator superfamily rbh
SCNpilot_cont_1000_bf_scaffold_454_4
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2516..4249
DNA (1734bp) protein (578aa)
PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit DhaK {ECO:0000313|EMBL:KJL44616.1}; EC=2.7.-.- {ECO:0000313|EMBL:KJL44616.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
dihydroxyacetone kinase; K00863 dihydroxyacetone kinase [EC:2.7.1.29] rbh
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002F1BE3B rbh
SCNpilot_cont_1000_bf_scaffold_454_5
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4242..4712
DNA (471bp) protein (157aa)
Putative sugar phosphate isomerase YwlF {ECO:0000313|EMBL:KJL44617.1}; EC=5.3.1.- {ECO:0000313|EMBL:KJL44617.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
ribose 5-phosphate isomerase RpiB; K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6]
ribose 5-phosphate isomerase n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B75A42
SCNpilot_cont_1000_bf_scaffold_454_6
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4712..5482
DNA (771bp) protein (257aa)
Triosephosphate isomerase {ECO:0000313|EMBL:KJL44618.1}; EC=5.3.1.1 {ECO:0000313|EMBL:KJL44618.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
triosephosphate isomerase; K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1]
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI000370904B rbh
SCNpilot_cont_1000_bf_scaffold_454_7
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5482..6279
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Promicromonospora sukumoe RepID=UPI000360F031 rbh
Xylose isomerase-like TIM barrel {ECO:0000313|EMBL:KJL44619.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein rbh
SCNpilot_cont_1000_bf_scaffold_454_8
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6276..7142
DNA (867bp) protein (289aa)
Ketol-acid reductoisomerase {ECO:0000313|EMBL:KJL44620.1}; EC=1.1.1.86 {ECO:0000313|EMBL:KJL44620.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
oxidoreductase n=1 Tax=Microbacterium yannicii RepID=UPI0002D3D19D rbh
hypothetical protein rbh
SCNpilot_cont_1000_bf_scaffold_454_9
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7237..7638)
DNA (402bp) protein (134aa)
Polyketide cyclase / dehydrase and lipid transport n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BHD6_SANKS
Polyketide cyclase / dehydrase and lipid transport {ECO:0000313|EMBL:KJL44621.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
polyketide cyclase / dehydrase and lipid transport
SCNpilot_cont_1000_bf_scaffold_454_10
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7737..8237
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Gordonia kroppenstedtii RepID=UPI00037147C1
Uncharacterized protein {ECO:0000313|EMBL:KJL44622.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_454_11
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8243..8599)
DNA (357bp) protein (119aa)
Uncharacterized conserved protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N9T5_MICTS
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:BAJ74554.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_1000_bf_scaffold_454_12
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8596..9006)
DNA (411bp) protein (137aa)
Predicted nucleotidyltransferase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N9T6_MICTS
nucleotidyltransferase; K07075
Predicted nucleotidyltransferase {ECO:0000313|EMBL:BAJ74555.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_1000_bf_scaffold_454_trna_1
unknown

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comp(9091..9161)
DNA (71bp)
transferRNA
SCNpilot_cont_1000_bf_scaffold_454_13
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9241..9846
DNA (606bp) protein (202aa)
Deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
dcd; deoxycytidine deaminase; K01494 dCTP deaminase [EC:3.5.4.13] rbh
deoxycytidine triphosphate deaminase n=1 Tax=Microbacterium barkeri RepID=UPI0002D4140F rbh
SCNpilot_cont_1000_bf_scaffold_454_14
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9878..11176)
DNA (1299bp) protein (433aa)
Coenzyme F420-dependent N5,N10-methylenetetrahydromethanopterin reductase n=1 Tax=Microbacterium sp. TS-1 RepID=U2YMY5_9MICO rbh
F420-dependent methylene-tetrahydromethanopterin reductase {ECO:0000313|EMBL:KHK96659.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase rbh
SCNpilot_cont_1000_bf_scaffold_454_15
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11173..12234)
DNA (1062bp) protein (354aa)
Nitrilotriacetate monooxygenase component A {ECO:0000313|EMBL:KJL29825.1}; EC=1.14.14.10 {ECO:0000313|EMBL:KJL29825.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
FMNH2-utilizing oxygenase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D1Q1_PSEUX
FMNH2-utilizing oxygenase
SCNpilot_cont_1000_bf_scaffold_454_16
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12423..13460
DNA (1038bp) protein (346aa)
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N732_MICTS rbh
dipeptide/oligopeptide/nickel ABC transporter permease; K02033 peptide/nickel transport system permease protein rbh
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components {ECO:0000313|EMBL:BAJ74249.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_1000_bf_scaffold_454_17
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13457..14413
DNA (957bp) protein (319aa)
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N731_MICTS rbh
Putative D,D-dipeptide transport system permease protein DdpC {ECO:0000313|EMBL:KJL29828.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
dipeptide/oligopeptide/nickel ABC transporter permease; K02034 peptide/nickel transport system permease protein rbh
SCNpilot_cont_1000_bf_scaffold_454_18
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14410..16047
DNA (1638bp) protein (546aa)
Glutathione import ATP-binding protein GsiA {ECO:0000313|EMBL:KJL19870.1}; EC=3.6.3.- {ECO:0000313|EMBL:KJL19870.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
ATPase components of various ABC-type transport systems, contain duplicated ATPase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N730_MICTS rbh
ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein rbh
SCNpilot_cont_1000_bf_scaffold_454_19
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16115..17728
DNA (1614bp) protein (538aa)
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N729_MICTS rbh
Nickel-binding periplasmic protein {ECO:0000313|EMBL:KJL29830.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
dipeptide ABC transporter periplasmic protein; K02035 peptide/nickel transport system substrate-binding protein rbh
SCNpilot_cont_1000_bf_scaffold_454_20
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17725..18747
DNA (1023bp) protein (341aa)
oxidoreductase n=1 Tax=Rhizobium giardinii RepID=UPI000373AECF rbh
Uncharacterized protein {ECO:0000313|EMBL:KHK99887.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
oxidoreductase rbh
SCNpilot_cont_1000_bf_scaffold_454_21
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18801..20093
DNA (1293bp) protein (431aa)
Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N728_MICTS rbh
coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase rbh
Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase {ECO:0000313|EMBL:BAJ74245.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_1000_bf_scaffold_454_22
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20090..20596
DNA (507bp) protein (169aa)
Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N727_MICTS
coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase
Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase {ECO:0000313|EMBL:BAJ74244.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_1000_bf_scaffold_454_23
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20735..21460
DNA (726bp) protein (242aa)
Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N727_MICTS
coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase
Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase {ECO:0000313|EMBL:BAJ74244.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_1000_bf_scaffold_454_24
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21489..22400
DNA (912bp) protein (304aa)
Uncharacterized conserved protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N726_MICTS rbh
hypothetical protein; K09164 hypothetical protein rbh
Uncharacterized conserved protein {ECO:0000313|EMBL:BAJ74243.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_1000_bf_scaffold_454_25
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22397..23563
DNA (1167bp) protein (389aa)
Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N725_MICTS rbh
coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase rbh
Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase {ECO:0000313|EMBL:BAJ74242.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_1000_bf_scaffold_454_26
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23560..24129
DNA (570bp) protein (190aa)
Histone acetyltransferase n=1 Tax=Microbacterium sp. TS-1 RepID=U2YMZ6_9MICO
Histone acetyltransferase {ECO:0000313|EMBL:GAD34474.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
permease of the major facilitator superfamily
SCNpilot_cont_1000_bf_scaffold_454_27
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24126..25211
DNA (1086bp) protein (362aa)
glycine/D-amino acid oxidase; K00301 sarcosine oxidase [EC:1.5.3.1] rbh
Glycine/D-amino acid oxidase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N723_MICTS rbh
Glycine/D-amino acid oxidase {ECO:0000313|EMBL:BAJ74240.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_1000_bf_scaffold_454_28
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25266..25787)
DNA (522bp) protein (174aa)
Histone acetyltransferase n=1 Tax=Microbacterium sp. TS-1 RepID=U2YMZ6_9MICO
Histone acetyltransferase {ECO:0000313|EMBL:GAD34474.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
histone acetyltransferase
SCNpilot_cont_1000_bf_scaffold_454_29
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25784..26938)
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=Arthrobacter sp. 161MFSha2.1 RepID=UPI00037F8DD5 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL29837.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
luciferase family protein rbh
Displaying items 1-30 of 160 in total

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