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SCNpilot_cont_1000_bf_scaffold_702

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_702_1
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(391..1386)
DNA (996bp) protein (332aa)
transcriptional regulator n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B444E6 rbh
HTH-type transcriptional regulator MalR {ECO:0000313|EMBL:KJL45337.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_702_2
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1596..2852
DNA (1257bp) protein (419aa)
hypothetical protein n=1 Tax=Microbacteriaceae RepID=UPI00035F5869 rbh
Maltose-binding periplasmic protein {ECO:0000313|EMBL:KJL45338.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
sugar ABC transporter periplasmic protein; K02027 multiple sugar transport system substrate-binding protein
SCNpilot_cont_1000_bf_scaffold_702_3
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2868..3995
DNA (1128bp) protein (376aa)
ABC transporter permease n=1 Tax=Leifsonia sp. 109 RepID=UPI000366BEA4 rbh
Lactose transport system permease protein LacF {ECO:0000313|EMBL:KJL45339.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
sugar ABC transporter permease; K02025 multiple sugar transport system permease protein rbh
SCNpilot_cont_1000_bf_scaffold_702_4
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3992..4852
DNA (861bp) protein (287aa)
ABC transporter permease n=1 Tax=Leifsonia sp. 109 RepID=UPI00036F1BDC rbh
L-arabinose transport system permease protein AraQ {ECO:0000313|EMBL:KJL45340.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
sugar ABC transporter permease; K02026 multiple sugar transport system permease protein
SCNpilot_cont_1000_bf_scaffold_702_5
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4849..5598
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI000360A4A1 rbh
Peptidase family S51 {ECO:0000313|EMBL:KJL45341.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
pepE; peptidase S51 dipeptidase E
SCNpilot_cont_1000_bf_scaffold_702_6
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5650..7590
DNA (1941bp) protein (647aa)
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI0003663A8E rbh
Amylo-alpha-1,6-glucosidase {ECO:0000313|EMBL:KJL45342.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
glycogen debranching enzyme rbh
SCNpilot_cont_1000_bf_scaffold_702_7
unknown

Not on your lists

comp(7503..7682)
DNA (180bp) protein (60aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_702_8
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8251..10551
DNA (2301bp) protein (767aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
rpoB; DNA-directed RNA polymerase, beta subunit/140 kD subunit; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003751EAD
SCNpilot_cont_1000_bf_scaffold_702_9
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10517..11551
DNA (1035bp) protein (345aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
rpoB; DNA-directed RNA polymerase, beta subunit/140 kD subunit; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
DNA-directed RNA polymerase subunit beta n=1 Tax=Microbacterium yannicii RepID=UPI0002E4241E
SCNpilot_cont_1000_bf_scaffold_702_10
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11593..15468
DNA (3876bp) protein (1292aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
rpoC; DNA-directed RNA polymerase, beta' subunit/160 kD subunit; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] rbh
DNA-directed RNA polymerase subunit beta' n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NF84_MICTS rbh
SCNpilot_cont_1000_bf_scaffold_702_11
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15612..16220
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E541_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL38219.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_702_12
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16260..16871)
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003496866
Uncharacterized protein {ECO:0000313|EMBL:KJL38218.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
glutamine cyclotransferase
SCNpilot_cont_1000_bf_scaffold_702_13
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17036..18004
DNA (969bp) protein (323aa)
ABC transporter n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E539_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL38217.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
ABC transporter
SCNpilot_cont_1000_bf_scaffold_702_14
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18024..18425
DNA (402bp) protein (134aa)
Methyl-accepting chemotaxis protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2YP61_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL38216.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
SCNpilot_cont_1000_bf_scaffold_702_15
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18617..19168
DNA (552bp) protein (184aa)
Spermidine/putrescine-binding periplasmic protein n=2 Tax=Microbacterium RepID=H8E537_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL38215.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
spermidine/putrescine-binding periplasmic protein
SCNpilot_cont_1000_bf_scaffold_702_16
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19294..20430
DNA (1137bp) protein (379aa)
Serine/threonine-protein kinase PknK {ECO:0000313|EMBL:KJL38214.1}; EC=2.7.11.1 {ECO:0000313|EMBL:KJL38214.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
serine/threonine protein kinase n=1 Tax=Microbacterium sp. B19 RepID=UPI000345738C rbh
serine/threonine protein kinase rbh
SCNpilot_cont_1000_bf_scaffold_702_17
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20431..26382
DNA (5952bp) protein (1984aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037A0B98 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL38213.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein rbh
SCNpilot_cont_1000_bf_scaffold_702_18
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26430..27395
DNA (966bp) protein (322aa)
MoxR-like ATPase; K03924 MoxR-like ATPase [EC:3.6.3.-] rbh
ATPase AAA n=1 Tax=Microbacterium sp. B19 RepID=UPI00034A5D62 rbh
ATPase family associated with various cellular activities (AAA) {ECO:0000313|EMBL:KJL38212.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
SCNpilot_cont_1000_bf_scaffold_702_19
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27392..28750
DNA (1359bp) protein (453aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037A1BC5 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL38211.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein rbh
SCNpilot_cont_1000_bf_scaffold_702_20
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28747..31248
DNA (2502bp) protein (834aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037DD4F4 rbh
Transglutaminase-like superfamily protein {ECO:0000313|EMBL:KJL38210.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
transglutaminase-like enzyme, cysteine protease rbh
SCNpilot_cont_1000_bf_scaffold_702_21
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31252..32934
DNA (1683bp) protein (561aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ABG5_9MICO rbh
FHA domain protein {ECO:0000313|EMBL:KJL38209.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
FHA domain rbh
SCNpilot_cont_1000_bf_scaffold_702_22
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33231..33503
DNA (273bp) protein (91aa)
Uncharacterized protein {ECO:0000313|EMBL:KJL38208.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
SCNpilot_cont_1000_bf_scaffold_702_23
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


33794..34162
DNA (369bp) protein (123aa)
30S ribosomal protein S12 n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NF70_MICTS
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
rpsL; ribosomal protein S12; K02950 small subunit ribosomal protein S12
SCNpilot_cont_1000_bf_scaffold_702_24
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


34168..34539
DNA (372bp) protein (124aa)
30S ribosomal protein S7 n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037F4901
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
rpsG; ribosomal protein S7; K02992 small subunit ribosomal protein S7
SCNpilot_cont_1000_bf_scaffold_702_25
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34550..36664
DNA (2115bp) protein (705aa)
elongation factor G n=1 Tax=Microbacterium sp. B19 RepID=UPI000347E7E6 rbh
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
fusA; translation elongation factors; K02355 elongation factor G rbh
SCNpilot_cont_1000_bf_scaffold_702_26
unknown

Not on your lists

36833..36910
DNA (78bp) protein (26aa)

This feature has no annotations

Displaying 26 items

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