name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_1000_bf_scaffold_47_1
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(844..1380)
|
nicotinate phosphoribosyltransferase n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034D2EC0
rbh
Nicotinate phosphoribosyltransferase {ECO:0000313|EMBL:KHQ97426.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
phosphoribosyltransferase; K07101
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_47_2
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1408..2748)
|
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.4 {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520};; IMP--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00011}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;"
adenylosuccinate synthetase n=1 Tax=Pandoraea sp. B-6 RepID=UPI000346EAC0
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_47_3
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2823..3983)
|
hisZ; hetero-octameric ATP phosphoribosyl transferase, tRNA synthetase-like subunit (EC:2.4.2.17); K02502 ATP phosphoribosyltransferase regulatory subunit
rbh
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000344A06E
rbh
ATP phosphoribosyltransferase regulatory subunit {ECO:0000256|HAMAP-Rule:MF_00125, ECO:0000256|SAAS:SAAS00089029}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
|
|
SCNpilot_cont_1000_bf_scaffold_47_4
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4022..4177)
|
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003601B27
Membrane protein {ECO:0000313|EMBL:KHQ93670.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
hypothetical protein; K09937 hypothetical protein
|
|
SCNpilot_cont_1000_bf_scaffold_47_5
Pandoraea sputorum, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4285..5187)
|
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003467DB9
rbh
Protein HflC {ECO:0000256|PIRNR:PIRNR005651}; TaxID=93222 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sputorum.;"
|
|
SCNpilot_cont_1000_bf_scaffold_47_6
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5200..6534)
|
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000344D568
rbh
Membrane protein {ECO:0000313|EMBL:AHB77533.1}; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;"
|
|
SCNpilot_cont_1000_bf_scaffold_47_7
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6774..7979)
|
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000346103E
rbh
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
small GTP-binding protein; K03665 GTP-binding protein HflX
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_47_8
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8043..8279)
|
RNA-binding protein Hfq n=3 Tax=Pandoraea RepID=V5UKR4_9BURK
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
RNA chaperone Hfq; K03666 host factor-I protein
|
|
SCNpilot_cont_1000_bf_scaffold_47_9
Pandoraea pulmonicola, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8406..9743)
|
GTP-binding protein Der n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034B4C98
rbh
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=93221 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pulmonicola.;"
ribosome-associated GTPase EngA; K03977 GTP-binding protein
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_47_10
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9821..11038)
|
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000346268E
rbh
Outer membrane protein assembly factor BamB {ECO:0000256|HAMAP-Rule:MF_00923}; Flags: Precursor;; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
outer membrane assembly lipoprotein YfgL
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_47_11
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11095..11724)
|
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003480FE0
rbh
Uncharacterized protein {ECO:0000313|EMBL:EON12050.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
hypothetical protein
|
|
SCNpilot_cont_1000_bf_scaffold_47_12
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11757..13133)
|
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
histidyl-tRNA synthase n=1 Tax=Pandoraea sp. B-6 RepID=UPI000346DF9B
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_47_13
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13155..14435)
|
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1]
rbh
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Pandoraea sp. B-6 RepID=UPI000348B763
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_47_14
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14454..15482)
|
XRE family transcriptional regulator n=1 Tax=Pandoraea pnomenusa 3kgm RepID=V5PSW5_9BURK
rbh
XRE family transcriptional regulator {ECO:0000313|EMBL:AHB06414.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;"
hypothetical protein
|
|
SCNpilot_cont_1000_bf_scaffold_47_15
Pandoraea vervacti, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15744..16865)
|
Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=6
50S rRNA methyltransferase n=1 Tax=Pandoraea sp. B-6 RepID=UPI000348FBAD
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_47_16
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16925..17350)
|
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:MF_00451};; Nucleoside-2-P kinase {ECO:0000256|HAMAP-Rule:MF_00451}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;"
nucleoside diphosphate kinase n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034C23EC
|
|
SCNpilot_cont_1000_bf_scaffold_47_17
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17759..18460
|
membrane protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034A0CE0
rbh
Membrane protein {ECO:0000313|EMBL:KHQ93659.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
hypothetical protein; K06890
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_47_18
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18692..20230)
|
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01010}; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;"
rumA; 23S rRNA 5-methyluridine methyltransferase (EC:2.1.1.35); K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
rbh
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00036D03DB
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_47_19
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20341..21117)
|
3''''-5'''' exonuclease n=1 Tax=Pandoraea sp. B-6 RepID=UPI000344FF62
rbh
Uncharacterized protein {ECO:0000313|EMBL:EON12058.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
hypothetical protein; K07501 hypothetical protein
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_47_20
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21232..22317)
|
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034615D8
rbh
RNA polymerase sigma factor RpoS {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma S {ECO:0000256|HAMAP-Rule:MF_00959}; Sigma-38 {ECO:0000256|HAMAP-Rule:MF_00959}; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;"
rpoS; RNA polymerase, sigma 38 subunit, RpoS; K03087 RNA polymerase nonessential primary-like sigma factor
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_47_21
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22333..23160)
|
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034A1DE4
rbh
Peptidase M23 {ECO:0000313|EMBL:EON12060.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
peptidase M23B; K06194 lipoprotein NlpD
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_47_22
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23193..24341)
|
Protein-L-isoaspartate O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; EC=2.1.1.77 {ECO:0000256|HAMAP-Rule:MF_00090};; L-isoaspartyl protein carboxyl methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; Protein L-isoaspartyl methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; Protein-beta-aspartate methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
rbh
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Pandoraea sp. SD6-2 RepID=R7WXT2_9BURK
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_47_23
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24338..25099)
|
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000344BA48
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_47_24
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25264..26064)
|
ABC transporter permease n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034798A8
rbh
ABC transporter permease {ECO:0000313|EMBL:AJE99518.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
binding-protein-dependent transport systems inner membrane component; K02050 NitT/TauT family transport system permease protein
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_47_25
unknown
|
Not on your lists |
comp(26104..26238)
|
This feature has no annotations |
|
SCNpilot_cont_1000_bf_scaffold_47_26
Pandoraea sputorum, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26245..27060)
|
mannosyltransferase n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034D5C0E
rbh
Mannosyltransferase {ECO:0000313|EMBL:AJC19048.1}; TaxID=93222 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sputorum.;"
ABC transporter related protein
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_47_27
Pandoraea oxalativorans, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27057..28088)
|
ABC transporter substrate-binding protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034B1905
rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:AKC70370.1}; TaxID=573737 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea oxalativorans.;"
signal peptide protein; K02051 NitT/TauT family transport system substrate-binding protein
rbh
|
|
SCNpilot_cont_1000_bf_scaffold_47_28
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28193..29518)
|
CoA transferase n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034DCE6D
rbh
CAIB/BAIF family protein {ECO:0000313|EMBL:EON12066.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
|
|
SCNpilot_cont_1000_bf_scaffold_47_29
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29721..30446)
|
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034784AE
rbh
Transcriptional regulator protein {ECO:0000313|EMBL:EON12067.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
two component transcriptional regulator, LuxR family
|
|
SCNpilot_cont_1000_bf_scaffold_47_30
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30818..31279
|
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034B9EBE
Uncharacterized protein {ECO:0000313|EMBL:AJE99515.2}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
|