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SCNpilot_cont_1000_bf_scaffold_406

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Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_406_1
Pandoraea oxalativorans, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

195..1205
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034C8211 rbh
Serine/threonine protein kinase {ECO:0000313|EMBL:AKC71724.1}; TaxID=573737 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea oxalativorans.;"
serine/threonine protein kinase rbh
SCNpilot_cont_1000_bf_scaffold_406_2
Pandoraea oxalativorans, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1312..1770)
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00037B1C9A rbh
Uncharacterized protein {ECO:0000313|EMBL:AKC71725.1}; TaxID=573737 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea oxalativorans.;"
hydrolase; K07038 inner membrane protein
SCNpilot_cont_1000_bf_scaffold_406_3
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2110..2838
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003493A83 rbh
Uncharacterized protein {ECO:0000313|EMBL:AJE97310.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_406_4
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2946..3869
DNA (924bp) protein (308aa)
SAM-dependent methyltransferase PhcB n=1 Tax=Pandoraea sp. B-6 RepID=UPI000348EF81 rbh
putative methyltransferase, type 11 rbh
Methyltransferase type 11 {ECO:0000313|EMBL:ACS22822.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
SCNpilot_cont_1000_bf_scaffold_406_trna_1
unknown

Not on your lists

2992..3065
DNA (74bp)
transferRNA
SCNpilot_cont_1000_bf_scaffold_406_5
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3951..4931)
DNA (981bp) protein (327aa)
MarR family transcriptional regulator n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003452A0A rbh
MarR family transcriptional regulator {ECO:0000313|EMBL:AJE97316.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
MarR family transcriptional regulator rbh
SCNpilot_cont_1000_bf_scaffold_406_6
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5068..5478)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003651C76
Uncharacterized protein {ECO:0000313|EMBL:AJE97317.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_406_7
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5700..6041
DNA (342bp) protein (114aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00037D961A
Alkylphosphonate utilization protein {ECO:0000313|EMBL:AJE97318.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
phnA; Alkylphosphonate utilization operon protein PhnA
SCNpilot_cont_1000_bf_scaffold_406_8
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6065..7243)
DNA (1179bp) protein (393aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034C3BE3 rbh
Nitrate ABC transporter substrate-binding protein {ECO:0000313|EMBL:AHB04925.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;"
nitrate ABC transporter substrate-binding protein; K15576 nitrate/nitrite transport system substrate-binding protein rbh
SCNpilot_cont_1000_bf_scaffold_406_9
Pandoraea oxalativorans, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7253..7828)
DNA (576bp) protein (192aa)
histidine kinase n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003652784 rbh
Histidine kinase {ECO:0000313|EMBL:AKC72705.1}; TaxID=573737 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea oxalativorans.;"
response regulator receiver/ANTAR domain-containing protein; K07183 response regulator NasT
SCNpilot_cont_1000_bf_scaffold_406_10
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8077..8880)
DNA (804bp) protein (268aa)
cobA-2; uroporphyrin-III C-methyltransferase (EC:2.1.1.107); K02303 uroporphyrin-III C-methyltransferase [EC:2.1.1.107] rbh
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034AD604 rbh
Uroporphyrin-III C-methyltransferase {ECO:0000313|EMBL:EON12332.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
SCNpilot_cont_1000_bf_scaffold_406_11
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8971..11688)
DNA (2718bp) protein (906aa)
nitrate reductase; K00372 nitrate reductase catalytic subunit [EC:1.7.99.4] rbh
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034A1E67 rbh
Nitrate reductase {ECO:0000313|EMBL:EON12333.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
SCNpilot_cont_1000_bf_scaffold_406_12
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11736..12101)
DNA (366bp) protein (122aa)
NAD(P)H-dependent nitrite reductase, small subunit; K00363 nitrite reductase (NAD(P)H) small subunit [EC:1.7.1.4]
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034DAF65
Nitrite reductase {ECO:0000313|EMBL:AJE97323.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
SCNpilot_cont_1000_bf_scaffold_406_13
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12112..14571)
DNA (2460bp) protein (820aa)
nitrite reductase (NAD(P)H), large subunit; K00362 nitrite reductase (NAD(P)H) large subunit [EC:1.7.1.4] rbh
nitrite reductase n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034DBFF7 rbh
Nitrite reductase (NAD(P)H), large subunit {ECO:0000313|EMBL:EON12335.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
SCNpilot_cont_1000_bf_scaffold_406_14
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14950..16119)
DNA (1170bp) protein (390aa)
butyryl-CoA dehydrogenase (EC:1.3.8.1); K06446 acyl-CoA dehydrogenase [EC:1.3.99.-] rbh
acyl-CoA dehydrogenase n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003481B51 rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EON12336.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
SCNpilot_cont_1000_bf_scaffold_406_15
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16162..17805)
DNA (1644bp) protein (548aa)
cyclohexanecarboxylate-CoA ligase; K04116 cyclohexanecarboxylate-CoA ligase [EC:6.2.1.-] rbh
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000347C7A6 rbh
Cyclohexanecarboxylate--CoA ligase {ECO:0000313|EMBL:AIU26511.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
SCNpilot_cont_1000_bf_scaffold_406_16
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17853..19007)
DNA (1155bp) protein (385aa)
Acyl-CoA dehydrogenase (EC:1.3.99.3); K04117 cyclohexanecarboxyl-CoA dehydrogenase [EC:1.3.99.-] rbh
acyl-CoA dehydrogenase n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034D5258 rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AIU26512.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
SCNpilot_cont_1000_bf_scaffold_406_17
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19022..19804)
DNA (783bp) protein (261aa)
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934}; Short=DHNA-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934};; EC=4.1.3.36 {ECO:0000256|HAMAP-Rule:MF_01934};; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;"
menB; naphthoate synthase (EC:4.1.3.36); K07536 2-ketocyclohexanecarboxyl-CoA hydrolase [EC:3.1.2.-] rbh
dihydroxynaphthoic acid synthetase n=1 Tax=Pandoraea sp. B-6 RepID=UPI000344EE84 rbh
SCNpilot_cont_1000_bf_scaffold_406_18
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19913..20680)
DNA (768bp) protein (256aa)
Short chain CoA dehydrogenase (EC:1.1.1.-); K07535 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase [EC:1.1.1.-] rbh
2-hydroxycyclohexane-1-carbonyl-CoA dehydrogenase n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034A1737 rbh
2-hydroxycyclohexanecarboxyl-CoA dehydrogenase {ECO:0000313|EMBL:AIU26514.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
SCNpilot_cont_1000_bf_scaffold_406_19
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20825..21376
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034527B7 rbh
Transcriptional regulator {ECO:0000313|EMBL:AJE97331.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
MarR family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_406_20
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21557..22030
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003461B77
MarR family transcriptional regulator {ECO:0000313|EMBL:AIU26515.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
slyA; MarR family transcriptional regulator, involved in virulence; K06075 MarR family transcriptional regulator, transcriptional regulator for hemolysin
SCNpilot_cont_1000_bf_scaffold_406_21
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22034..24043
DNA (2010bp) protein (670aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000347F44E rbh
Transporter {ECO:0000313|EMBL:KHQ93432.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
inner membrane efflux transporter rbh
SCNpilot_cont_1000_bf_scaffold_406_22
Pandoraea sputorum, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24040..24249
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000346789E
Membrane protein {ECO:0000313|EMBL:AJC18149.1}; TaxID=93222 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sputorum.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_406_23
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24246..25211
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000345CBD9 rbh
Membrane protein {ECO:0000313|EMBL:AJE97335.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
secretion protein HlyD family rbh
SCNpilot_cont_1000_bf_scaffold_406_24
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25313..26740
DNA (1428bp) protein (476aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000362F6B9 rbh
RND transporter {ECO:0000313|EMBL:KHQ92693.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
NodT family RND efflux system outer membrane lipoprotein rbh
SCNpilot_cont_1000_bf_scaffold_406_25
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26953..27213)
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034D0309
Uncharacterized protein {ECO:0000313|EMBL:KHQ93428.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
SCNpilot_cont_1000_bf_scaffold_406_26
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27483..28250)
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034B1062 rbh
Uncharacterized protein {ECO:0000313|EMBL:AJE97338.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
LuxR family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_406_27
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28399..29292)
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034D8BCE rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KHQ92690.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
LysR family transcriptional regulator rbh
SCNpilot_cont_1000_bf_scaffold_406_28
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29403..30863)
DNA (1461bp) protein (487aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034CFE71 rbh
Multidrug transporter {ECO:0000313|EMBL:KHQ92687.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
outer membrane protein OprM 1 rbh
SCNpilot_cont_1000_bf_scaffold_406_29
Pandoraea sp. SD6-2, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30860..33997)
DNA (3138bp) protein (1046aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI0003481DDB rbh
Multidrug efflux protein {ECO:0000313|EMBL:EON12352.1}; TaxID=1286093 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. SD6-2.;"
multidrug efflux protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family rbh
Displaying items 1-30 of 50 in total

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