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SCNpilot_cont_1000_bf_scaffold_219

Search features with annotation key words

Displaying items 1-30 of 153 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_219_1
Mycobacterium aromaticivorans, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(535..1557)
DNA (1023bp) protein (341aa)
Integrase family protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X9Q3_NAKMY
Uncharacterized protein {ECO:0000313|EMBL:KDE96727.1}; TaxID=1440774 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium aromaticivorans JS19b1 = JCM 16368.;"
integrase
SCNpilot_cont_1000_bf_scaffold_219_2
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1554..2681)
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Streptomyces davawensis JCM 4913 RepID=K4R9M0_9ACTO rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CCK32976.1}; TaxID=1214101 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces davawensis JCM 4913.;"
SCNpilot_cont_1000_bf_scaffold_219_3
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2845..4146
DNA (1302bp) protein (434aa)
Uncharacterized protein n=1 Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YM13_NOCFA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD60778.1}; TaxID=247156 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;"
SCNpilot_cont_1000_bf_scaffold_219_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4166..4522
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE722
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28876.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_bf_scaffold_219_5
unknown

Not on your lists

4714..4986
DNA (273bp) protein (91aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_219_6
Streptomyces sviceus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4991..6025
DNA (1035bp) protein (345aa)
Putative uncharacterized protein n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5HS67_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:EDY55672.1}; TaxID=463191 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sviceus ATCC 29083.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_219_7
Corynebacterium diphtheriae, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6452..8311
DNA (1860bp) protein (620aa)
Putative DNA restriction-modification system, DNA methylase n=1 Tax=Corynebacterium diphtheriae (strain HC04) RepID=H2HWF0_CORDL rbh
modA2; putative DNA restriction-modification system, DNA methylase rbh
Putative DNA methylase {ECO:0000313|EMBL:CAE50429.1}; TaxID=257309 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium diphtheriae (strain ATCC 700971 / NCTC 13129 / Biotype; gravis).;"
SCNpilot_cont_1000_bf_scaffold_219_8
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8308..10788
DNA (2481bp) protein (827aa)
type III restriction enzyme, res subunit; K01156 type III restriction enzyme [EC:3.1.21.5] rbh
hypothetical protein n=1 Tax=Micromonospora sp. CNB394 RepID=UPI000374EE23 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGH45841.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
SCNpilot_cont_1000_bf_scaffold_219_9
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10834..11517
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XL75_MICPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK33763.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
SCNpilot_cont_1000_bf_scaffold_219_10
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11525..11956
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Frankia sp. QA3 RepID=I8QQ08_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KHD78894.1}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_219_11
unknown

Not on your lists

11965..12081
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_219_12
BJP_08E140C01_Actinomycetales_70_11, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

12078..12821
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B51AAD
hypothetical protein
Tax=BJP_08E140C01_Actinomycetales_70_11
SCNpilot_cont_1000_bf_scaffold_219_13
Tetrasphaera australiensis, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13019..13786
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002D8E351
Putative RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:CCH73774.1}; TaxID=1193182 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera australiensis Ben110.;"
sigma-70 family RNA polymerase sigma factor
SCNpilot_cont_1000_bf_scaffold_219_14
unknown

Not on your lists

13770..14000
DNA (231bp) protein (77aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_219_15
Mycobacterium parascrofulaceum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14066..14290
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Mycobacterium parascrofulaceum ATCC BAA-614 RepID=D5P6L8_9MYCO
Uncharacterized protein {ECO:0000313|EMBL:EFG78288.1}; TaxID=525368 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium parascrofulaceum ATCC BAA-614.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_219_16
unknown

Not on your lists

14339..14650
DNA (312bp) protein (104aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_219_17
unknown

Not on your lists

15074..15586
DNA (513bp) protein (171aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_219_18
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15710..16675)
DNA (966bp) protein (322aa)
TIR protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C9R2_SPHS2
TIR protein
TIR protein {ECO:0000313|EMBL:ADZ81447.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCNpilot_cont_1000_bf_scaffold_219_19
unknown

Not on your lists

16939..17187
DNA (249bp) protein (83aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_219_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17224..17760)
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F2L6J6_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA28890.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_bf_scaffold_219_21
unknown

Not on your lists

comp(17934..18299)
DNA (366bp) protein (122aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_219_22
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18872..21376)
DNA (2505bp) protein (835aa)
Uncharacterized protein n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6W9S5_ACTMD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU37292.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
SCNpilot_cont_1000_bf_scaffold_219_23
unknown

Not on your lists

comp(21430..21801)
DNA (372bp) protein (124aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_219_24
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21929..22624)
DNA (696bp) protein (232aa)
Phosphoesterase PA-phosphatase related protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJY5_PSEUX
phosphoesterase PA-phosphatase-like protein
Phosphoesterase PA-phosphatase related protein {ECO:0000313|EMBL:AEA27010.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_bf_scaffold_219_25
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22621..23595)
DNA (975bp) protein (325aa)
Integral membrane protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CMT0_PSEUX
hypothetical protein
Integral membrane protein {ECO:0000313|EMBL:AEA25029.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_bf_scaffold_219_26
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23592..24242)
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00037AE7EC rbh
phosphoesterase PA-phosphatase-like protein
Phosphoesterase PA-phosphatase related protein {ECO:0000313|EMBL:AEA27010.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_bf_scaffold_219_27
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24236..25150)
DNA (915bp) protein (305aa)
undecaprenyl-diphosphatase (EC:3.6.1.27); K06153 undecaprenyl-diphosphatase [EC:3.6.1.27]
hypothetical protein n=1 Tax=Amycolatopsis methanolica RepID=UPI00037EE995
Phosphoesterase PA-phosphatase related protein {ECO:0000313|EMBL:AIJ23942.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
SCNpilot_cont_1000_bf_scaffold_219_28
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25152..25856)
DNA (705bp) protein (235aa)
Putative membrane protein n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8K3A7_STREN
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CCB75371.1}; Uncharacterized protein {ECO:0000313|EMBL:AEW95018.1}; TaxID=1003195 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC; 14057 / NRRL 8057).;"
SCNpilot_cont_1000_bf_scaffold_219_29
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25967..26410
DNA (444bp) protein (148aa)
Transcriptional repressor, CopY family n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJY7_PSEUX
CopY family transcriptional regulator
Transcriptional repressor, CopY family {ECO:0000313|EMBL:AEA27012.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_1000_bf_scaffold_219_30
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26417..27382
DNA (966bp) protein (322aa)
Peptidase M48 Ste24p n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJY8_PSEUX
Uncharacterized protein {ECO:0000313|EMBL:ETK37470.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
peptidase M48 Ste24p
Displaying items 1-30 of 153 in total

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