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SCNpilot_cont_1000_bf_scaffold_676

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_676_1
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..2172)
DNA (2172bp) protein (724aa)
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase n=1 Tax=Nitratireductor indicus C115 RepID=K2PP73_9RHIZ rbh
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:EKF42887.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
SCNpilot_cont_1000_bf_scaffold_676_2
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2339..2812)
DNA (474bp) protein (158aa)
molybdopterin biosynthesis MoaE protein; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-]
Molybdenum cofactor biosynthesis protein MoaE n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FGZ9_9RHIZ
Molybdenum cofactor biosynthesis protein MoaE {ECO:0000313|EMBL:ESX75492.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
SCNpilot_cont_1000_bf_scaffold_676_3
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2816..3106)
DNA (291bp) protein (97aa)
molybdenum cofactor biosynthesis protein MoaD n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003119F17
Molybdopterin synthase sulfur carrier subunit {ECO:0000256|RuleBase:RU362014}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
molybdopterin converting factor subunit 1; K03636 molybdopterin synthase sulfur carrier subunit
SCNpilot_cont_1000_bf_scaffold_676_4
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3090..3674)
DNA (585bp) protein (195aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LKP8_RHITR
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:KGF69215.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
SCNpilot_cont_1000_bf_scaffold_676_5
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3777..5834)
DNA (2058bp) protein (686aa)
UvrABC system protein C n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HQG6_9RHIZ
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
uvrC; excinuclease ABC subunit C; K03703 excinuclease ABC subunit C
SCNpilot_cont_1000_bf_scaffold_676_6
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5861..6625)
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003792BE5
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADV13825.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_1000_bf_scaffold_676_7
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6954..7616
DNA (663bp) protein (221aa)
Porin n=1 Tax=Nitratireductor indicus C115 RepID=K2NY79_9RHIZ
Porin {ECO:0000313|EMBL:EKF42879.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_676_8
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7683..8279)
DNA (597bp) protein (199aa)
glutathione S-transferase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003122F03
glutathione S-transferase domain-containing protein
Glutathione S-transferase domain protein {ECO:0000313|EMBL:AEH89626.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_1000_bf_scaffold_676_9
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8467..9048)
DNA (582bp) protein (194aa)
Ribonuclease I n=1 Tax=Phyllobacterium sp. YR531 RepID=J3HL87_9RHIZ
Ribonuclease I {ECO:0000313|EMBL:EJM98742.1}; Flags: Precursor;; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
ribonuclease T2
SCNpilot_cont_1000_bf_scaffold_676_10
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9170..9622)
DNA (453bp) protein (151aa)
UPI0003CED6A9 related cluster n=1 Tax=unknown RepID=UPI0003CED6A9
Uncharacterized protein {ECO:0000313|EMBL:CDX24704.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_676_11
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9696..10550)
DNA (855bp) protein (285aa)
Ribosomal RNA large subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_00934}; EC=2.1.1.266 {ECO:0000256|HAMAP-Rule:MF_00934};; 23S rRNA (adenine(2030)-N6)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; 23S rRNA m6A2030 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
lactate dehydrogenase n=1 Tax=Hoeflea sp. 108 RepID=UPI000368A6E3
hypothetical protein; K07115
SCNpilot_cont_1000_bf_scaffold_676_12
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10596..12701
DNA (2106bp) protein (702aa)
nitrate reductase (EC:1.7.99.4)
UPI0003CFFD9E related cluster n=1 Tax=unknown RepID=UPI0003CFFD9E
Nitrate reductase {ECO:0000313|EMBL:CDX61639.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
SCNpilot_cont_1000_bf_scaffold_676_13
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12713..13426)
DNA (714bp) protein (238aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
phosphoribosylglycinamide formyltransferase; K11175 phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
Phosphoribosylglycinamide formyltransferase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EPP5_9RHIZ
SCNpilot_cont_1000_bf_scaffold_676_14
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13426..14490)
DNA (1065bp) protein (355aa)
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1); K01933 phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
phosphoribosylaminoimidazole synthetase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002FB0F6C
SCNpilot_cont_1000_bf_scaffold_676_15
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14713..15270
DNA (558bp) protein (186aa)
hypothetical protein; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
Uncharacterized protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BRJ4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM72196.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
SCNpilot_cont_1000_bf_scaffold_676_16
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15242..16411
DNA (1170bp) protein (390aa)
Membrane protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FJB3_9RHIZ
Membrane protein {ECO:0000313|EMBL:ESX75468.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_676_17
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16415..17113
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000364F40D
Uncharacterized protein {ECO:0000313|EMBL:EZQ15133.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
Chromosomal replication initiator DnaA
SCNpilot_cont_1000_bf_scaffold_676_18
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17135..17464)
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YFR1_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH09418.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_676_19
unknown

Not on your lists

comp(18190..18453)
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035C3C80
SCNpilot_cont_1000_bf_scaffold_676_20
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18487..18714)
DNA (228bp) protein (76aa)
Uncharacterized protein {ECO:0000313|EMBL:CDX36692.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
SCNpilot_cont_1000_bf_scaffold_676_21
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18822..19031)
DNA (210bp) protein (70aa)
cold-shock protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000380A540
DNA-binding transcriptional repressor {ECO:0000313|EMBL:CDX22166.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
cold-shock DNA-binding protein family protein; K03704 cold shock protein (beta-ribbon, CspA family)
SCNpilot_cont_1000_bf_scaffold_676_trna_1
unknown

Not on your lists

comp(19336..19408)
DNA (73bp)
transferRNA
SCNpilot_cont_1000_bf_scaffold_676_22
unknown

Not on your lists

19593..19868
DNA (276bp) protein (92aa)
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_676_23
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20018..20878)
DNA (861bp) protein (287aa)
TrmH family RNA methyltransferase; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
TrmH family RNA methyltransferase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YBZ4_9RHIZ
TrmH family RNA methyltransferase {ECO:0000313|EMBL:EHH10740.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
SCNpilot_cont_1000_bf_scaffold_676_24
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21022..21447
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ERK7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCV07469.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
phasin family protein
SCNpilot_cont_1000_bf_scaffold_676_25
bacterium YEK0313, Bacteria

Not on your lists

21456..22724
DNA (1269bp) protein (423aa)
lactate 2-monooxygenase; K00467 lactate 2-monooxygenase [EC:1.13.12.4]
Glycolate oxidase n=1 Tax=Deinococcus geothermalis (strain DSM 11300) RepID=Q1J0Q6_DEIGD
Lactate 2-monooxygenase {ECO:0000313|EMBL:CEJ14041.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCNpilot_cont_1000_bf_scaffold_676_26
Mesorhizobium sp. LSHC414A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22783..25530)
DNA (2748bp) protein (916aa)
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=1287287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC414A00.;"
ribonuclease, Rne/Rng family; K08300 ribonuclease E [EC:3.1.26.12]
UPI0003CF90C6 related cluster n=1 Tax=unknown RepID=UPI0003CF90C6
SCNpilot_cont_1000_bf_scaffold_676_27
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25972..27216
DNA (1245bp) protein (415aa)
cell wall hydrolase/autolysin; K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] rbh
hypothetical protein n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00037E8DD8
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EHK54935.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
SCNpilot_cont_1000_bf_scaffold_676_28
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27428..29929
DNA (2502bp) protein (834aa)
penicillin-binding protein (EC:2.4.1.129); K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-]
1A family penicillin-binding protein n=1 Tax=Nitratireductor indicus C115 RepID=K2N5K5_9RHIZ
1A family penicillin-binding protein {ECO:0000313|EMBL:EKF42698.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
SCNpilot_cont_1000_bf_scaffold_676_29
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30192..31160
DNA (969bp) protein (323aa)
Translation releasing factor RF-2 n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98NB3_RHILO
peptide chain release factor 2; K02836 peptide chain release factor 2
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
Displaying items 1-30 of 48 in total

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