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SCNpilot_cont_1000_bf_scaffold_802

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_802_1
Burkholderia sp. AU4i, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..1704
DNA (1704bp) protein (568aa)
Cation efflux system protein CusA n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2GCX5_BURVI
Cation efflux system protein CusA {ECO:0000313|EMBL:ERJ40945.1}; TaxID=1335308 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia sp. AU4i.;"
acrB/AcrD/AcrF family protein
SCNpilot_cont_1000_bf_scaffold_802_2
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1897..2046
DNA (150bp) protein (50aa)
L-aspartate ABC transporter membrane protein / L-glutamate ABC transporter membrane protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1B0Y9_PARDP
polar amino acid ABC transporter inner membrane subunit; K10002 glutamate/aspartate transport system permease protein
L-aspartate ABC transporter membrane protein / L-glutamate ABC transporter membrane protein {ECO:0000313|EMBL:ABL69183.1}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus denitrificans (strain Pd 1222).;"
SCNpilot_cont_1000_bf_scaffold_802_3
unknown

Not on your lists

comp(2141..2413)
DNA (273bp) protein (91aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_802_4
unknown

Not on your lists

2568..2762
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_802_5
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2822..3934)
DNA (1113bp) protein (371aa)
Bll1572 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89U47_BRADU
Uncharacterized protein {ECO:0000313|EMBL:KKB76805.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_802_6
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3927..5375)
DNA (1449bp) protein (483aa)
Phage integrase family protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=I9XEH3_RHILT
Phage integrase family protein {ECO:0000313|EMBL:EJB07506.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
Phage integrase family
SCNpilot_cont_1000_bf_scaffold_802_7
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6151..6921)
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036A072F
Transcriptional regulator {ECO:0000313|EMBL:EIM29960.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
kipR; IclR family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_802_8
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

7061..7744
DNA (684bp) protein (228aa)
demethylmenaquinone methyltransferase n=1 Tax=Schlesneria paludicola RepID=UPI00029ABBC1
Demethylmenaquinone methyltransferase {ECO:0000313|EMBL:EDL58065.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
putative aldolase
SCNpilot_cont_1000_bf_scaffold_802_9
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7777..8445
DNA (669bp) protein (223aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0U7L3_METS4
polar amino acid ABC transporter inner membrane subunit; K02029 polar amino acid transport system permease protein
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ACA16235.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCNpilot_cont_1000_bf_scaffold_802_10
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8452..9102
DNA (651bp) protein (217aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IQ80_METNO
polar amino acid ABC transporter inner membrane subunit; K02029 polar amino acid transport system permease protein
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ACL58580.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_cont_1000_bf_scaffold_802_11
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9147..9968
DNA (822bp) protein (274aa)
Extracellular solute-binding protein family 3 n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IQ81_METNO
family 3 extracellular solute-binding protein; K02030 polar amino acid transport system substrate-binding protein
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:ACA16233.1}; Flags: Precursor;; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCNpilot_cont_1000_bf_scaffold_802_12
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10131..10964
DNA (834bp) protein (278aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
dihydroxypteroate synthase; K00796 dihydropteroate synthase [EC:2.5.1.15]
UPI0003CFB812 related cluster n=1 Tax=unknown RepID=UPI0003CFB812 rbh
SCNpilot_cont_1000_bf_scaffold_802_13
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10996..12114)
DNA (1119bp) protein (373aa)
UPI0003CFBB36 related cluster n=1 Tax=unknown RepID=UPI0003CFBB36 rbh
Coenzyme PQQ synthesis protein E {ECO:0000256|HAMAP-Rule:MF_00660}; Pyrroloquinoline quinone biosynthesis protein E {ECO:0000256|HAMAP-Rule:MF_00660}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
coenzyme PQQ biosynthesis protein E; K06139 pyrroloquinoline quinone biosynthesis protein E rbh
SCNpilot_cont_1000_bf_scaffold_802_14
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12111..12407)
DNA (297bp) protein (99aa)
UPI0003CE1214 related cluster n=1 Tax=unknown RepID=UPI0003CE1214
Coenzyme PQQ synthesis protein D {ECO:0000313|EMBL:CDX24724.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
coenzyme PQQ biosynthesis protein PqqD
SCNpilot_cont_1000_bf_scaffold_802_15
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12407..13162)
DNA (756bp) protein (252aa)
Pyrroloquinoline-quinone synthase {ECO:0000256|HAMAP-Rule:MF_00654}; EC=1.3.3.11 {ECO:0000256|HAMAP-Rule:MF_00654};; Coenzyme PQQ synthesis protein C {ECO:0000256|HAMAP-Rule:MF_00654}; Pyrroloquinoline quinone biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_00654}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
coenzyme PQQ biosynthesis protein C (EC:1.3.3.11); K06137 pyrroloquinoline-quinone synthase [EC:1.3.3.11] rbh
UPI0003CEF4E5 related cluster n=1 Tax=unknown RepID=UPI0003CEF4E5 rbh
SCNpilot_cont_1000_bf_scaffold_802_16
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13159..14097)
DNA (939bp) protein (313aa)
Coenzyme PQQ biosynthesis protein B n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TEB9_MESCW rbh
Coenzyme PQQ synthesis protein B {ECO:0000256|HAMAP-Rule:MF_00653, ECO:0000256|SAAS:SAAS00055095}; Pyrroloquinoline quinone biosynthesis protein B {ECO:0000256|HAMAP-Rule:MF_00653}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
coenzyme PQQ biosynthesis protein B; K06136 pyrroloquinoline quinone biosynthesis protein B rbh
SCNpilot_cont_1000_bf_scaffold_802_17
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14248..14343)
DNA (96bp) protein (32aa)
Coenzyme PQQ biosynthesis protein A n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TEB8_MESCW
coenzyme PQQ biosynthesis protein A
Coenzyme PQQ biosynthesis protein A {ECO:0000313|EMBL:ADV13411.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_1000_bf_scaffold_802_18
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14487..15074)
DNA (588bp) protein (196aa)
Rhodanese domain-containing protein (Fragment) n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HRE7_9RHIZ
Rhodanese domain-containing protein {ECO:0000313|EMBL:EHK56682.1}; Flags: Fragment;; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
rhodanese domain-containing protein
SCNpilot_cont_1000_bf_scaffold_802_19
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15106..15999)
DNA (894bp) protein (298aa)
UPI0003D00F83 related cluster n=1 Tax=unknown RepID=UPI0003D00F83 rbh
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:CDX13063.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
family 3 extracellular solute-binding protein rbh
SCNpilot_cont_1000_bf_scaffold_802_20
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15987..16508)
DNA (522bp) protein (174aa)
UPI0003D0124D related cluster n=1 Tax=unknown RepID=UPI0003D0124D
Putative cytochrome c protein {ECO:0000313|EMBL:CDX32776.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
cytochrome C protein
SCNpilot_cont_1000_bf_scaffold_802_21
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16691..18610)
DNA (1920bp) protein (640aa)
Putative dehydrogenase XoxF {ECO:0000313|EMBL:CDX13058.1}; EC=1.1.99.- {ECO:0000313|EMBL:CDX13058.1};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
PQQ-dependent dehydrogenase, methanol/ethanol family n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TEB4_MESCW rbh
methanol/ethanol family PQQ-dependent dehydrogenase rbh
SCNpilot_cont_1000_bf_scaffold_802_22
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19302..19670
DNA (369bp) protein (123aa)
UPI0003CFB40F related cluster n=1 Tax=unknown RepID=UPI0003CFB40F
Uncharacterized protein {ECO:0000313|EMBL:ESZ27816.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_802_23
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19699..20655)
DNA (957bp) protein (319aa)
Sulfur oxidation protein SoxZ n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HRE2_9RHIZ rbh
Sulfur oxidation protein SoxZ {ECO:0000313|EMBL:EHK56721.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
sulfur oxidation protein SoxZ rbh
SCNpilot_cont_1000_bf_scaffold_802_24
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20652..21473)
DNA (822bp) protein (274aa)
UPI0003D03BD6 related cluster n=1 Tax=unknown RepID=UPI0003D03BD6 rbh
Beta-lactamase {ECO:0000313|EMBL:ESZ21527.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
hypothetical protein rbh
SCNpilot_cont_1000_bf_scaffold_802_25
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22175..22993)
DNA (819bp) protein (273aa)
UPI0003D0200A related cluster n=1 Tax=unknown RepID=UPI0003D0200A rbh
ABC transporter permease {ECO:0000313|EMBL:ESZ21529.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
binding-protein-dependent transport system inner membrane protein; K02050 NitT/TauT family transport system permease protein rbh
SCNpilot_cont_1000_bf_scaffold_802_26
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22990..23979)
DNA (990bp) protein (330aa)
UPI0003CE4EBE related cluster n=1 Tax=unknown RepID=UPI0003CE4EBE rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:CDX24702.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
ABC transporter substrate-binding protein rbh
SCNpilot_cont_1000_bf_scaffold_802_27
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24021..24230)
DNA (210bp) protein (70aa)
UPI0003CF9DF7 related cluster n=1 Tax=unknown RepID=UPI0003CF9DF7
Uncharacterized protein {ECO:0000313|EMBL:CDX13043.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_802_28
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24605..24988
DNA (384bp) protein (128aa)
Cytochrome c-550 n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FD85_9RHIZ
Cytochrome c2 {ECO:0000313|EMBL:CDX44868.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
cytochrome C; K08738 cytochrome c
SCNpilot_cont_1000_bf_scaffold_802_29
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25140..25844)
DNA (705bp) protein (235aa)
Phosphoglycolate phosphatase {ECO:0000256|SAAS:SAAS00077902}; EC=3.1.3.18 {ECO:0000256|SAAS:SAAS00077902};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
phosphoglycolate phosphatase; K01091 phosphoglycolate phosphatase [EC:3.1.3.18] rbh
UPI0003CEB8DE related cluster n=1 Tax=unknown RepID=UPI0003CEB8DE rbh
SCNpilot_cont_1000_bf_scaffold_802_30
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25841..26398)
DNA (558bp) protein (186aa)
alkyl hydroperoxide reductase n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI0003158CE1 rbh
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:CDX24695.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen rbh
Displaying items 1-30 of 44 in total

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