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SCNpilot_cont_1000_p_scaffold_577

Search features with annotation key words

Displaying items 1-30 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_577_1
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..814)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X1D4_OCHA4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS15038.1}; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
SCNpilot_cont_1000_p_scaffold_577_2
bacterium YEK0313, Bacteria

Not on your lists

comp(817..981)
DNA (165bp) protein (55aa)
UPI0003D0634F related cluster n=1 Tax=unknown RepID=UPI0003D0634F
Uncharacterized protein {ECO:0000313|EMBL:CEJ15987.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCNpilot_cont_1000_p_scaffold_577_3
Roseivivax isoporae, Roseivivax, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(978..2117)
DNA (1140bp) protein (380aa)
Phage Gp37Gp68 n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CDE2_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:ETX26623.1}; TaxID=1449351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseivivax.;" source="Roseivivax isoporae LMG 25204.;"
Gp37Gp68 family protein
SCNpilot_cont_1000_p_scaffold_577_4
Streptomyces phage phiC31, Phic3unalikevirus, Caudovirales, Viruses

Not on your lists

comp(2117..2761)
DNA (645bp) protein (215aa)
Gp7 n=1 Tax=Streptomyces phage phiC31 RepID=Q38028_BPPHC
Gp7 {ECO:0000313|EMBL:CAA07132.1}; ORF 7 {ECO:0000313|EMBL:CAA53918.1}; TaxID=10719 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae; Phic3unalikevirus.;" source="Streptomyces phage phiC31 (Bacteriophage phi-C31).;"
HNH endonuclease
SCNpilot_cont_1000_p_scaffold_577_5
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2754..3752)
DNA (999bp) protein (333aa)
Retron-type reverse transcriptase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3CSK1_9BRAD
Retron-type reverse transcriptase {ECO:0000313|EMBL:EJN11814.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
RNA-directed DNA polymerase
SCNpilot_cont_1000_p_scaffold_577_6
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4072..4443)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3I158_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EJN11813.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_577_7
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4483..5415)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2VZS6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EJN11812.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_577_8
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5465..6373)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2VZS6_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EJN11812.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_577_9
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6405..6608)
DNA (204bp) protein (68aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HR03_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK56865.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
SCNpilot_cont_1000_p_scaffold_577_10

Not on your lists

comp(6605..6946)
DNA (342bp) protein (114aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL97464.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_cont_1000_p_scaffold_577_11

Not on your lists

comp(6939..7283)
DNA (345bp) protein (115aa)
Putative uncharacterized protein n=1 Tax=Emiliania huxleyi virus PS401 RepID=G8DH77_9VIRU
Putative uncharacterized protein {ECO:0000313|EMBL:AET73324.1}; TaxID=754068 species="Viruses; dsDNA viruses, no RNA stage; unclassified dsDNA viruses.;" source="Emiliania huxleyi virus PS401.;"
SCNpilot_cont_1000_p_scaffold_577_12
unknown

Not on your lists

comp(7276..7617)
DNA (342bp) protein (114aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_577_13
unknown

Not on your lists

comp(7614..8033)
DNA (420bp) protein (140aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_577_14
unknown

Not on your lists

comp(8026..8265)
DNA (240bp) protein (80aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_577_15
unknown

Not on your lists

comp(8262..8612)
DNA (351bp) protein (117aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_577_16
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8797..9315)
DNA (519bp) protein (173aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HQY3_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK56845.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_577_17
unknown

Not on your lists

comp(9315..9419)
DNA (105bp) protein (35aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_577_18
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10040..10438)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0PZ77_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCM77100.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_577_19
unknown

Not on your lists

10643..10942
DNA (300bp) protein (100aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_577_20
unknown

Not on your lists

10935..11156
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_577_21
unknown

Not on your lists

11153..11554
DNA (402bp) protein (134aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_577_22
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11694..12173
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2PSF7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF44007.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_577_23
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12170..12652
DNA (483bp) protein (161aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HQX4_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK56836.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_577_24
Brevundimonas sp. BAL3, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12649..13329
DNA (681bp) protein (227aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W6T8_9CAUL
Putative uncharacterized protein {ECO:0000313|EMBL:EDX80033.1}; TaxID=391600 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. BAL3.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_577_25
Brevundimonas sp. BAL3, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13331..14272
DNA (942bp) protein (314aa)
ATPase, AAA family protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W6T7_9CAUL rbh
ATPase, AAA family protein {ECO:0000313|EMBL:EDX79692.1}; TaxID=391600 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. BAL3.;"
AAA ATPase, central domain-containing protein
SCNpilot_cont_1000_p_scaffold_577_26
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14269..15720
DNA (1452bp) protein (484aa)
Mlr8507 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q982T3_RHILO rbh
hypothetical protein rbh
Mlr8507 protein {ECO:0000313|EMBL:BAB54373.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_1000_p_scaffold_577_27
unknown

Not on your lists

15717..15824
DNA (108bp) protein (36aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_577_28
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15808..16443
DNA (636bp) protein (212aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=765911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocystis.;" source="Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) (Chromatium; violascens).;"
DNA modification methylase n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3YEH5_THIV6
DNA modification methylase
SCNpilot_cont_1000_p_scaffold_577_29
RLO_OD1_Nomurabacteria_46_14, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

16440..16769
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. L103C120A0 RepID=V7HLL8_9RHIZ
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_46_14_curated
SCNpilot_cont_1000_p_scaffold_577_30
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16766..17167
DNA (402bp) protein (134aa)
Uncharacterized protein {ECO:0000313|EMBL:CDX55915.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Displaying items 1-30 of 78 in total

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