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SCNpilot_cont_1000_p_scaffold_2164

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_2164_1
unknown

Not on your lists

comp(2..634)
DNA (633bp) protein (211aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2164_2
unknown

Not on your lists

664..906
DNA (243bp) protein (81aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2164_3
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1124..2701
DNA (1578bp) protein (526aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Methylobacterium extorquens DSM 13060 RepID=H1KU59_METEX
Putative uncharacterized protein {ECO:0000313|EMBL:EHP83367.1}; Flags: Fragment;; TaxID=882800 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens DSM 13060.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2164_4
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2706..3587
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) RepID=C5B4X4_METEA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS43506.1}; TaxID=272630 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1).;"
SCNpilot_cont_1000_p_scaffold_2164_5
unknown

Not on your lists

3584..4765
DNA (1182bp) protein (394aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2164_6
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4750..6453
DNA (1704bp) protein (568aa)
molybdopterin oxidoreductase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002F47F3C
Molybdopterin-binding protein {ECO:0000313|EMBL:KJC59258.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein; K07147
SCNpilot_cont_1000_p_scaffold_2164_7
unknown

Not on your lists

6521..6742
DNA (222bp) protein (74aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2164_8
Deinococcus proteolyticus, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

6820..7695
DNA (876bp) protein (292aa)
NERD domain protein n=1 Tax=Deinococcus proteolyticus (strain ATCC 35074 / DSM 20540 / JCM 6276 / NBRC 101906 / NCIMB 13154 / VKM Ac-1939 / CCM 2703) RepID=F0RK10_DEIPM
NERD domain protein
NERD domain protein {ECO:0000313|EMBL:ADY26656.1}; TaxID=693977 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus proteolyticus (strain ATCC 35074 / DSM 20540 / JCM 6276 /; NBRC 101906 / NCIMB 13154 / VKM Ac-1939 / CCM 2703).;"
SCNpilot_cont_1000_p_scaffold_2164_9
unknown

Not on your lists

comp(7720..8457)
DNA (738bp) protein (246aa)
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2164_10
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8460..9302)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FTN4_ACICJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ28966.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
SCNpilot_cont_1000_p_scaffold_2164_11
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9499..10116
DNA (618bp) protein (206aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
tdk; thymidine kinase (EC:2.7.1.21); K00857 thymidine kinase [EC:2.7.1.21]
Thymidine kinase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YMK2_9RHIZ
SCNpilot_cont_1000_p_scaffold_2164_12
unknown

Not on your lists

comp(10184..10870)
DNA (687bp) protein (229aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2164_13
unknown

Not on your lists

comp(10889..11176)
DNA (288bp) protein (96aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2164_14
unknown

Not on your lists

comp(11176..11523)
DNA (348bp) protein (116aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2164_15
unknown

Not on your lists

comp(11520..12047)
DNA (528bp) protein (176aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2164_16
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12109..12984)
DNA (876bp) protein (292aa)
Uncharacterized protein n=2 Tax=Methylobacterium extorquens RepID=C5B5D5_METEA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS43667.1}; TaxID=272630 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1).;"
SCNpilot_cont_1000_p_scaffold_2164_17
unknown

Not on your lists

13119..13778
DNA (660bp) protein (220aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2164_18
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13793..14131
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J5PLU7_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW11627.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2164_19
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14128..14340
DNA (213bp) protein (71aa)
Putative uncharacterized protein n=1 Tax=Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) RepID=Q7WLS4_BORBR
hypothetical protein
Putative N-acetyltransferase YedL {ECO:0000313|EMBL:KDD50723.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica OSU553.;"
SCNpilot_cont_1000_p_scaffold_2164_20
Desulfurivibrio alkaliphilus, Desulfurivibrio, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14351..15868)
DNA (1518bp) protein (506aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 77 RepID=UPI000360888A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH85713.1}; TaxID=589865 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfurivibrio.;" source="Desulfurivibrio alkaliphilus (strain DSM 19089 / UNIQEM U267 / AHT2).;"
SCNpilot_cont_1000_p_scaffold_2164_21
Sphingomonas sp. SKA58, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15883..16083)
DNA (201bp) protein (67aa)
Possible ATP-dependent exodeoxyribonuclease (Subunit A) n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NEA6_9SPHN
Possible ATP-dependent exodeoxyribonuclease (Subunit A) {ECO:0000313|EMBL:EAT09444.1}; TaxID=314266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. (strain SKA58).;"
UvrD/REP helicase
Displaying 21 items

View Taxonomy