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SCNpilot_cont_1000_p_scaffold_2898

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_2898_1
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..523)
DNA (522bp) protein (174aa)
Phage-related integrase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSG8_9BURK
Phage-related integrase {ECO:0000313|EMBL:EIK92158.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
phage-related integrase
SCNpilot_cont_1000_p_scaffold_2898_2
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(520..1590)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=3 Tax=Pseudomonas aeruginosa RepID=U8HF66_PSEAI
integrase
Uncharacterized protein {ECO:0000313|EMBL:ERV82949.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BL04.;"
SCNpilot_cont_1000_p_scaffold_2898_3
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2420..2575)
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Alcaligenes sp. EGD-AK7 RepID=U1YE49_9BURK
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
SCNpilot_cont_1000_p_scaffold_2898_4
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2605..3357
DNA (753bp) protein (251aa)
receptor protein-tyrosine kinase n=1 Tax=Pseudomonas aeruginosa RepID=UPI0002D8A8B9 rbh
hypothetical protein rbh
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
SCNpilot_cont_1000_p_scaffold_2898_5
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3476..3688
DNA (213bp) protein (71aa)
Phage transcriptional regulator AlpA n=4 Tax=Proteobacteria RepID=M5J024_9BURK
Transcriptional regulator, AlpA family {ECO:0000313|EMBL:KDD55602.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica OSU553.;"
phage transcriptional regulator AlpA; K07733 prophage regulatory protein
SCNpilot_cont_1000_p_scaffold_2898_6
Alcaligenes sp. EGD-AK7, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3731..4606
DNA (876bp) protein (292aa)
Cobyrinic acid a,c-diamide synthase n=2 Tax=Alcaligenes RepID=M5IVP0_9BURK rbh
Cobyrinic acid a,c-diamide synthase {ECO:0000313|EMBL:ERI33722.1}; TaxID=1386079 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes sp. EGD-AK7.;"
cobyrinic acid a,c-diamide synthase; K12055 chromosome partitioning related protein ParA rbh
SCNpilot_cont_1000_p_scaffold_2898_7
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4590..4838
DNA (249bp) protein (83aa)
Cobyrinic acid a,c-diamide synthase n=4 Tax=Proteobacteria RepID=U1ZRQ2_9BURK
Pseudomonas putida strain UASWS0946 Contig180, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48519.1}; TaxID=303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (Arthrobacter siderocapsulatus).;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2898_8
Alcaligenes sp. EGD-AK7, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4831..6480
DNA (1650bp) protein (550aa)
Uncharacterized protein n=2 Tax=Alcaligenes RepID=M5IZ59_9BURK rbh
Integrating conjugative element ParB {ECO:0000313|EMBL:ERI33720.1}; TaxID=1386079 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes sp. EGD-AK7.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_2898_9
Alcaligenes sp. EGD-AK7, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6496..7056
DNA (561bp) protein (187aa)
Uncharacterized protein n=2 Tax=Alcaligenes RepID=M5J1D1_9BURK rbh
Coproporphyrinogen III oxidase {ECO:0000313|EMBL:ERI33719.1}; TaxID=1386079 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes sp. EGD-AK7.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_2898_10
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7060..8286
DNA (1227bp) protein (409aa)
Uncharacterized protein n=2 Tax=Alcaligenes RepID=M5IU31_9BURK rbh
hypothetical protein rbh
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
SCNpilot_cont_1000_p_scaffold_2898_11
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8605..9384
DNA (780bp) protein (260aa)
Uncharacterized protein n=2 Tax=Alcaligenes RepID=M5J021_9BURK rbh
hypothetical protein rbh
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
SCNpilot_cont_1000_p_scaffold_2898_12
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9381..9908
DNA (528bp) protein (176aa)
Uncharacterized protein n=2 Tax=Alcaligenes RepID=M5IVN8_9BURK rbh
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
SCNpilot_cont_1000_p_scaffold_2898_13
Alcaligenes sp. EGD-AK7, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9981..10421
DNA (441bp) protein (147aa)
Single-stranded DNA-binding protein n=1 Tax=Alcaligenes sp. EGD-AK7 RepID=U1YE40_9BURK rbh
Single-stranded DNA-binding protein {ECO:0000256|PIRNR:PIRNR002070}; TaxID=1386079 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes sp. EGD-AK7.;"
ssb3; single-stranded DNA-binding protein; K03111 single-strand DNA-binding protein
SCNpilot_cont_1000_p_scaffold_2898_14
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10262..10672)
DNA (411bp) protein (137aa)
Uncharacterized protein n=3 Tax=Xylella fastidiosa RepID=Q9PCK2_XYLFA
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
SCNpilot_cont_1000_p_scaffold_2898_15
Alcaligenes sp. EGD-AK7, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10700..12712
DNA (2013bp) protein (671aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=1386079 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes sp. EGD-AK7.;"
DNA topoisomerase III (EC:5.99.1.2); K03169 DNA topoisomerase III [EC:5.99.1.2] rbh
DNA topoisomerase n=2 Tax=Alcaligenes RepID=M5IZ56_9BURK rbh
SCNpilot_cont_1000_p_scaffold_2898_16
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13163..14770
DNA (1608bp) protein (536aa)
DNA methyltransferase; K00558 DNA (cytosine-5-)-methyltransferase [EC:2.1.1.37] rbh
Cytosine-specific methyltransferase n=2 Tax=Alcaligenes RepID=M5J1C8_9BURK rbh
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
SCNpilot_cont_1000_p_scaffold_2898_17
Alcaligenes sp. EGD-AK7, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15013..15570
DNA (558bp) protein (186aa)
Uncharacterized protein n=2 Tax=Alcaligenes RepID=M5IU30_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:ERI33713.1}; TaxID=1386079 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes sp. EGD-AK7.;"
hypothetical protein rbh
SCNpilot_cont_1000_p_scaffold_2898_18
Pseudomonas pseudoalcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15902..16114
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Xylella fastidiosa 32 RepID=V8L3T7_XYLFS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM40549.1}; TaxID=1182590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes CECT 5344.;"
SCNpilot_cont_1000_p_scaffold_2898_19
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16136..16528
DNA (393bp) protein (131aa)
Uncharacterized protein n=2 Tax=Alcaligenes RepID=M5IVN6_9BURK
hypothetical protein
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
SCNpilot_cont_1000_p_scaffold_2898_20
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16702..17388
DNA (687bp) protein (229aa)
Uncharacterized protein n=2 Tax=Alcaligenes RepID=M5IZ53_9BURK rbh
hypothetical protein rbh
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
SCNpilot_cont_1000_p_scaffold_2898_21
RLO_Pseudomonas_60_38, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17469..18206
DNA (738bp) protein (246aa)
Uncharacterized protein n=2 Tax=Alcaligenes RepID=M5J1C4_9BURK rbh
hypothetical protein rbh
Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated
SCNpilot_cont_1000_p_scaffold_2898_22
Alcaligenes sp. EGD-AK7, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18304..18462
DNA (159bp) protein (53aa)
Uncharacterized protein n=5 Tax=Proteobacteria RepID=M5IU28_9BURK
Uridylate kinase {ECO:0000313|EMBL:ERI33708.1}; TaxID=1386079 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes sp. EGD-AK7.;"
hypothetical protein
Displaying 22 items

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