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SCNpilot_cont_1000_p_scaffold_2924

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_2924_1
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71..487
DNA (417bp) protein (139aa)
PREDICTED: dCTP pyrophosphatase 1-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1772E
Nucleotide pyrophosphohydrolase {ECO:0000313|EMBL:KEH13916.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2924_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

484..2082
DNA (1599bp) protein (533aa)
hypothetical protein n=1 Tax=Chryseobacterium taeanense RepID=UPI0002F11733 rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD42317.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
ATP/GTP-binding protein; K09384 hypothetical protein
SCNpilot_cont_1000_p_scaffold_2924_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2184..2423)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2XAP2_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD42317.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 15835.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_2924_4
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2574..5180)
DNA (2607bp) protein (869aa)
Uncharacterized protein n=4 Tax=Pseudomonas aeruginosa RepID=S0I4N2_PSEAI rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAJ83116.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
SCNpilot_cont_1000_p_scaffold_2924_5
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5177..5410)
DNA (234bp) protein (78aa)
Uncharacterized protein n=3 Tax=Pseudomonas aeruginosa RepID=S0I9X6_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ83117.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
SCNpilot_cont_1000_p_scaffold_2924_6
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5473..6657)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=4 Tax=Pseudomonas aeruginosa RepID=S0HTY9_PSEAI rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EIT68004.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;"
SCNpilot_cont_1000_p_scaffold_2924_7
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6650..8707)
DNA (2058bp) protein (686aa)
Uncharacterized protein n=4 Tax=Pseudomonas aeruginosa RepID=S0I7V4_PSEAI rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EBA47293.1}; TaxID=425067 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei 305.;"
SCNpilot_cont_1000_p_scaffold_2924_8
BJP_08E140C01_10KDA_Sphingomonadales_62_47, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8751..9797)
DNA (1047bp) protein (349aa)
hypothetical protein n=1 Tax=Gluconacetobacter europaeus RepID=UPI000374390D rbh
Tax=BJP_08E140C01_10KDA_Sphingomonadales_62_47
SCNpilot_cont_1000_p_scaffold_2924_9
Xanthomonas euvesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9798..12578)
DNA (2781bp) protein (927aa)
Possible Type II restriction enzyme, methylase subunit n=4 Tax=Pseudomonas aeruginosa RepID=Q02RQ0_PSEAB rbh
Type II restriction enzyme, methylase subunit rbh
Putative DNA methylase {ECO:0000313|EMBL:CAJ23842.1}; TaxID=316273 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. vesicatoria (strain 85-10).;"
SCNpilot_cont_1000_p_scaffold_2924_10
Xanthomonas campestris, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12637..12786)
DNA (150bp) protein (50aa)
Phage transcriptional regulator, AlpA n=5 Tax=Proteobacteria RepID=A1W8W6_ACISJ
hypothetical protein
Transcriptional regulator {ECO:0000313|EMBL:KFA06726.1}; TaxID=1094183 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. musacearum NCPPB 2005.;"
SCNpilot_cont_1000_p_scaffold_2924_11
Xanthomonas euvesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13092..13430
DNA (339bp) protein (113aa)
Uncharacterized protein n=4 Tax=Pseudomonas aeruginosa RepID=S0HTZ1_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ23840.1}; TaxID=316273 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. vesicatoria (strain 85-10).;"
SCNpilot_cont_1000_p_scaffold_2924_12
Xanthomonas euvesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13649..13879)
DNA (231bp) protein (77aa)
Uncharacterized protein n=4 Tax=Gammaproteobacteria RepID=Q3BTM0_XANC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ23839.1}; TaxID=316273 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. vesicatoria (strain 85-10).;"
SCNpilot_cont_1000_p_scaffold_2924_13
Xanthomonas euvesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13946..15568)
DNA (1623bp) protein (541aa)
P-type conjugative transfer protein TrbL n=4 Tax=Pseudomonas aeruginosa RepID=S0HT53_PSEAI rbh
trbL; mating pair formation protein TrbL; K07344 type IV secretion system protein TrbL rbh
Conjugal transfer protein TrbL {ECO:0000313|EMBL:CAJ23838.1}; TaxID=316273 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. vesicatoria (strain 85-10).;"
SCNpilot_cont_1000_p_scaffold_2924_14
Xanthomonas euvesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15565..15840)
DNA (276bp) protein (92aa)
Possible entry/exclusion protein TrbK n=4 Tax=Pseudomonas aeruginosa RepID=Q02RQ4_PSEAB
trbK; entry/exclusion protein TrbK
Entry exclusion protein TrbK {ECO:0000313|EMBL:CAJ23837.1}; Flags: Precursor;; TaxID=316273 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campestris pv. vesicatoria (strain 85-10).;"
SCNpilot_cont_1000_p_scaffold_2924_15
Xanthomonas alfalfae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15858..16643)
DNA (786bp) protein (262aa)
Mating pair formation protein TrbJ n=4 Tax=Pseudomonas aeruginosa RepID=Q02RQ5_PSEAB rbh
trbJ; conjugal transfer protein TrbJ rbh
Conjugal transfer protein TrbJ {ECO:0000313|EMBL:AEO42549.1}; TaxID=981368 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. citrumelo F1.;"
SCNpilot_cont_1000_p_scaffold_2924_16
unknown

Not on your lists

comp(16813..16911)
DNA (99bp) protein (33aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_2924_17
Xanthomonas alfalfae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16908..17279)
DNA (372bp) protein (124aa)
OriT-binding protein, TraJ n=4 Tax=Pseudomonas aeruginosa RepID=Q02RQ6_PSEAB
traJ; conjugal transfer relaxosome component TraJ
Uncharacterized protein {ECO:0000313|EMBL:AEO42550.1}; TaxID=981368 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. citrumelo F1.;"
SCNpilot_cont_1000_p_scaffold_2924_18
Xanthomonas alfalfae, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17573..17860)
DNA (288bp) protein (96aa)
Possible oriT-binding protein, TraK n=4 Tax=Pseudomonas aeruginosa RepID=Q02RQ7_PSEAB
traK; oriT-binding protein, TraK
Uncharacterized protein {ECO:0000313|EMBL:AEO42551.1}; TaxID=981368 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis pv. citrumelo F1.;"
SCNpilot_cont_1000_p_scaffold_2924_19
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18330..18764)
DNA (435bp) protein (145aa)
MerR from Tn4378, regulatory protein involved in Hg(II) resistance n=1 Tax=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) RepID=Q1L9H3_RALME
putative transcriptional regulator MerR; K08365 MerR family transcriptional regulator, mercuric resistance operon regulatory protein
Transcriptional regulator MerR {ECO:0000313|EMBL:EJO30855.1}; TaxID=1156919 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii HLE.;"
SCNpilot_cont_1000_p_scaffold_2924_20
Achromobacter sp. AO22, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18836..19135
DNA (300bp) protein (100aa)
Mercuric transport protein MerT n=8 Tax=Proteobacteria RepID=Q02RR0_PSEAB
merT; mercuric transport protein; K08363 mercuric ion transport protein
Mercuric transport protein {ECO:0000313|EMBL:ACH56215.1}; TaxID=554819 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. AO22.;"
Displaying 20 items

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