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SCNpilot_cont_1000_p_scaffold_4284

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_4284_1
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..941)
DNA (939bp) protein (313aa)
CNT family concentrative nucleoside transporter n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GRB8_9BRAD
CNT family concentrative nucleoside transporter {ECO:0000313|EMBL:ERF80122.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_4284_2
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

981..1268
DNA (288bp) protein (96aa)
Putative Competence-damaged protein n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YLQ5_BRASO
competence-damaged protein
Putative Competence-damaged protein {ECO:0000313|EMBL:CAL74831.1}; TaxID=114615 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain ORS278).;"
SCNpilot_cont_1000_p_scaffold_4284_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1301..2620)
DNA (1320bp) protein (440aa)
beta-lactamase, partial n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B575CC rbh
Beta-lactamase {ECO:0000313|EMBL:KIZ41733.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
Beta-lactamase rbh
SCNpilot_cont_1000_p_scaffold_4284_4
unknown

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2856..3113
DNA (258bp) protein (86aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_4284_5
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3236..4519)
DNA (1284bp) protein (428aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI00036063DC rbh
Iron transporter {ECO:0000313|EMBL:EXL04992.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
natural resistance-associated macrophage protein rbh
SCNpilot_cont_1000_p_scaffold_4284_6
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4770..5210)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTQ5_PUSST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEC21019.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
SCNpilot_cont_1000_p_scaffold_4284_7
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5309..5695)
DNA (387bp) protein (129aa)
Succinate dehydrogenase, hydrophobic membrane anchor protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2K220_9PROT
Succinate dehydrogenase, hydrophobic membrane anchor protein {ECO:0000313|EMBL:KEZ77712.1}; TaxID=1304275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" source="Salinisphaera hydrothermalis C41B8.;"
sdhD; succinate dehydrogenase, hydrophobic membrane anchor subunit
SCNpilot_cont_1000_p_scaffold_4284_8
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5696..6133)
DNA (438bp) protein (146aa)
succinate dehydrogenase subunit C (EC:1.3.5.1); K00241 succinate dehydrogenase cytochrome b556 subunit
Succinate dehydrogenase subunit C {ECO:0000313|EMBL:ABI56681.1}; EC=1.3.5.1 {ECO:0000313|EMBL:ABI56681.1};; TaxID=187272 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
Succinate dehydrogenase subunit C n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A906_ALKEH
SCNpilot_cont_1000_p_scaffold_4284_9
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6166..7023)
DNA (858bp) protein (286aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
succinate dehydrogenase and fumarate reductase iron-sulfur protein (EC:1.3.5.1); K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1]
Succinate dehydrogenase iron-sulfur subunit n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WE66_9GAMM
SCNpilot_cont_1000_p_scaffold_4284_10
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7010..7258)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QM45_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62702.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_1000_p_scaffold_4284_11
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7279..7557)
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QNW3_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE62084.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_1000_p_scaffold_4284_12
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7912..9075)
DNA (1164bp) protein (388aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PAG5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KFG69417.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
diguanylate cyclase
SCNpilot_cont_1000_p_scaffold_4284_13
unknown

Not on your lists

9305..9412
DNA (108bp) protein (36aa)

This feature has no annotations

Displaying 13 items

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