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SCNpilot_cont_1000_p_scaffold_4634

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_4634_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(212..556)
DNA (345bp) protein (115aa)
Endoribonuclease L-PSP n=1 Tax=Burkholderia phenoliruptrix BR3459a RepID=K0E3N3_9BURK
Putative translation initiation inhibitor, yjgF family {ECO:0000313|EMBL:KFC64705.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
endoribonuclease L-PSP
SCNpilot_cont_1000_p_scaffold_4634_2
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(615..1232)
DNA (618bp) protein (206aa)
PuuR n=3 Tax=Pantoea ananas RepID=D4GEW6_PANAM
Putative transcriptional regulator {ECO:0000313|EMBL:KFC64706.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
HTH-type transcriptional regulator PuuR
SCNpilot_cont_1000_p_scaffold_4634_3
unknown

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comp(1311..1469)
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_4634_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1534..3222
DNA (1689bp) protein (563aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002D57A8C rbh
Uncharacterized protein {ECO:0000313|EMBL:KFC64707.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein rbh
SCNpilot_cont_1000_p_scaffold_4634_5
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3304..4257
DNA (954bp) protein (318aa)
Oligopeptide ABC transporter, permease protein AppB n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RKH0_9PROT
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:KFC64708.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter permease; K02033 peptide/nickel transport system permease protein
SCNpilot_cont_1000_p_scaffold_4634_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4257..5141
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002F85424 rbh
Putative peptide transporter permease subunit: membrane component of ABC superfamily protein {ECO:0000313|EMBL:KFC64709.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ABC transporter permease; K02034 peptide/nickel transport system permease protein
SCNpilot_cont_1000_p_scaffold_4634_7
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5303..6415)
DNA (1113bp) protein (371aa)
UPI0003CF38DF related cluster n=1 Tax=unknown RepID=UPI0003CF38DF rbh
Transposase {ECO:0000313|EMBL:ESW77789.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
transposase IS4 family protein rbh
SCNpilot_cont_1000_p_scaffold_4634_8
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6597..6836
DNA (240bp) protein (80aa)
Nitroreductase-like protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5S2M2_RHIET
nitroreductase-like protein
Nitroreductase-like protein {ECO:0000313|EMBL:AGS24443.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
SCNpilot_cont_1000_p_scaffold_4634_9
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7072..7830)
DNA (759bp) protein (253aa)
IstB-like ATP-binding protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8U4F4_9PROT
IstB-like ATP-binding protein {ECO:0000313|EMBL:EDP61049.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
IstB ATP binding domain-containing protein
SCNpilot_cont_1000_p_scaffold_4634_10
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7854..8876)
DNA (1023bp) protein (341aa)
ISPsy14, transposase n=1 Tax=alpha proteobacterium BAL199 RepID=A8U4F3_9PROT
ISPsy14, transposase {ECO:0000313|EMBL:EDP61048.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
integrase
Displaying 10 items

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