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SCNpilot_cont_1000_p_scaffold_3140

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_p_scaffold_3140_1
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..580)
DNA (579bp) protein (193aa)
Virulence-associated E family protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WI42_9GAMM
Virulence-associated E family protein {ECO:0000313|EMBL:EIL99133.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
virulence-associated E family protein
SCNpilot_cont_1000_p_scaffold_3140_2
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(577..1626)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WI41_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL99132.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
zinc finger CHC2-family protein rbh
SCNpilot_cont_1000_p_scaffold_3140_3
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1614..1940)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WI40_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL99131.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_cont_1000_p_scaffold_3140_4
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1937..2131)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WI39_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL99130.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_cont_1000_p_scaffold_3140_5
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2110..2328)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WI38_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL99129.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_cont_1000_p_scaffold_3140_6
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2330..2707)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WI37_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL99128.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_3140_7
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2805..3056)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WI36_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL99127.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_cont_1000_p_scaffold_3140_8
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3135..3557
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WI35_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL99126.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_cont_1000_p_scaffold_3140_9
unknown

Not on your lists

3623..3805
DNA (183bp) protein (61aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3140_10
unknown

Not on your lists

comp(3795..4100)
DNA (306bp) protein (102aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3140_11
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4271..4540
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WI33_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL99124.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_cont_1000_p_scaffold_3140_12
unknown

Not on your lists

4543..4752
DNA (210bp) protein (70aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3140_13
unknown

Not on your lists

4749..5120
DNA (372bp) protein (124aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3140_14
unknown

Not on your lists

5117..5428
DNA (312bp) protein (104aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3140_15
unknown

Not on your lists

5425..5577
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3140_16
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5574..6014
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WI29_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL99120.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_3140_17
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6176..6535
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WI28_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL99119.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
yfdP; hypothetical protein
SCNpilot_cont_1000_p_scaffold_3140_18
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6588..7427
DNA (840bp) protein (280aa)
Prophage protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WI27_9GAMM rbh
Prophage protein {ECO:0000313|EMBL:EIL99118.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_3140_19
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7489..7752
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=blood disease bacterium R229 RepID=G2ZJ69_9RALS
Uncharacterized protein {ECO:0000313|EMBL:AJE99614.1}; TaxID=93218 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
SCNpilot_cont_1000_p_scaffold_3140_20
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7755..8081
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WI25_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL99116.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_cont_1000_p_scaffold_3140_21
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8078..8290
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WI23_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL99114.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
SCNpilot_cont_1000_p_scaffold_3140_22
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8287..8775
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WI21_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL99112.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_3140_23
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8814..9251
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WI29_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL99120.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_3140_24
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9276..9710
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WI20_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL99111.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
SCNpilot_cont_1000_p_scaffold_3140_25
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9707..11080
DNA (1374bp) protein (458aa)
RNA-directed DNA polymerase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WI19_9GAMM rbh
RNA-directed DNA polymerase {ECO:0000313|EMBL:EIL99110.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
RNA-directed DNA polymerase
SCNpilot_cont_1000_p_scaffold_3140_26
unknown

Not on your lists

11073..11393
DNA (321bp) protein (107aa)

This feature has no annotations

SCNpilot_cont_1000_p_scaffold_3140_27
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11386..12048
DNA (663bp) protein (221aa)
site-specific DNA methylase; K00558 DNA (cytosine-5-)-methyltransferase [EC:2.1.1.37]
Site-specific DNA methylase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WI17_9GAMM
Site-specific DNA methylase {ECO:0000313|EMBL:EIL99108.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Displaying 27 items

View Taxonomy